Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VCX3AQ9NNX9 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
VCX3AQ9NNX9 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VCX3AQ9NNX9 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.15■□□□□ 0.66
VCX3AQ9NNX9 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.15■□□□□ 0.66
VCX3AQ9NNX9 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
VCX3AQ9NNX9 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
VCX3AQ9NNX9 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VCX3AQ9NNX9 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
VCX3AQ9NNX9 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.15■□□□□ 0.66
VCX3AQ9NNX9 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
VCX3AQ9NNX9 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
VCX3AQ9NNX9 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
VCX3AQ9NNX9 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
VCX3AQ9NNX9 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
VCX3AQ9NNX9 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.14■□□□□ 0.65
VCX3AQ9NNX9 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VCX3AQ9NNX9 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.14■□□□□ 0.65
VCX3AQ9NNX9 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VCX3AQ9NNX9 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VCX3AQ9NNX9 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.14■□□□□ 0.65
VCX3AQ9NNX9 FZD10-202ENST00000539839 3282 ntBASIC19.14■□□□□ 0.65
VCX3AQ9NNX9 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
VCX3AQ9NNX9 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
VCX3AQ9NNX9 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VCX3AQ9NNX9 AC007613.1-201ENST00000572811 2597 ntBASIC19.14■□□□□ 0.65
VCX3AQ9NNX9 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VCX3AQ9NNX9 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.14■□□□□ 0.65
VCX3AQ9NNX9 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VCX3AQ9NNX9 AC020907.5-201ENST00000624372 1936 ntBASIC19.13■□□□□ 0.65
VCX3AQ9NNX9 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.13■□□□□ 0.65
VCX3AQ9NNX9 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
VCX3AQ9NNX9 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
VCX3AQ9NNX9 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
VCX3AQ9NNX9 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
VCX3AQ9NNX9 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.13■□□□□ 0.65
VCX3AQ9NNX9 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VCX3AQ9NNX9 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
VCX3AQ9NNX9 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC19.13■□□□□ 0.65
VCX3AQ9NNX9 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
VCX3AQ9NNX9 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VCX3AQ9NNX9 SRP68-213ENST00000629930 165 ntTSL 5 BASIC19.13■□□□□ 0.65
VCX3AQ9NNX9 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VCX3AQ9NNX9 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VCX3AQ9NNX9 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.13■□□□□ 0.65
VCX3AQ9NNX9 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VCX3AQ9NNX9 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VCX3AQ9NNX9 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VCX3AQ9NNX9 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
VCX3AQ9NNX9 NOC2LP1-202ENST00000452600 2235 ntBASIC19.13■□□□□ 0.65
VCX3AQ9NNX9 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
VCX3AQ9NNX9 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
VCX3AQ9NNX9 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
VCX3AQ9NNX9 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
VCX3AQ9NNX9 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
VCX3AQ9NNX9 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
VCX3AQ9NNX9 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VCX3AQ9NNX9 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VCX3AQ9NNX9 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VCX3AQ9NNX9 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
VCX3AQ9NNX9 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VCX3AQ9NNX9 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VCX3AQ9NNX9 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VCX3AQ9NNX9 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
VCX3AQ9NNX9 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
VCX3AQ9NNX9 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.12■□□□□ 0.65
VCX3AQ9NNX9 AC027702.1-201ENST00000563810 1770 ntBASIC19.12■□□□□ 0.65
VCX3AQ9NNX9 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VCX3AQ9NNX9 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VCX3AQ9NNX9 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VCX3AQ9NNX9 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.12■□□□□ 0.65
VCX3AQ9NNX9 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
VCX3AQ9NNX9 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VCX3AQ9NNX9 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.12■□□□□ 0.65
VCX3AQ9NNX9 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
VCX3AQ9NNX9 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.12■□□□□ 0.65
VCX3AQ9NNX9 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VCX3AQ9NNX9 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
VCX3AQ9NNX9 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
VCX3AQ9NNX9 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VCX3AQ9NNX9 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VCX3AQ9NNX9 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
VCX3AQ9NNX9 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
VCX3AQ9NNX9 AL032819.2-201ENST00000624543 2162 ntBASIC19.12■□□□□ 0.65
VCX3AQ9NNX9 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.12■□□□□ 0.65
VCX3AQ9NNX9 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
VCX3AQ9NNX9 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
VCX3AQ9NNX9 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VCX3AQ9NNX9 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VCX3AQ9NNX9 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
VCX3AQ9NNX9 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.11■□□□□ 0.65
VCX3AQ9NNX9 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VCX3AQ9NNX9 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
VCX3AQ9NNX9 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VCX3AQ9NNX9 OR7E47P-201ENST00000546390 1422 ntBASIC19.11■□□□□ 0.65
VCX3AQ9NNX9 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VCX3AQ9NNX9 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VCX3AQ9NNX9 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
VCX3AQ9NNX9 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VCX3AQ9NNX9 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms