Protein–RNA interactions for Protein: Q9BV44

THUMPD3, THUMP domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3Q9BV44 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
THUMPD3Q9BV44 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
THUMPD3Q9BV44 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
THUMPD3Q9BV44 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.56■□□□□ 0.72
THUMPD3Q9BV44 AC105265.2-201ENST00000467189 838 ntBASIC19.56■□□□□ 0.72
THUMPD3Q9BV44 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.56■□□□□ 0.72
THUMPD3Q9BV44 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.56■□□□□ 0.72
THUMPD3Q9BV44 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.56■□□□□ 0.72
THUMPD3Q9BV44 AC112907.3-201ENST00000577781 2400 ntBASIC19.56■□□□□ 0.72
THUMPD3Q9BV44 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.56■□□□□ 0.72
THUMPD3Q9BV44 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
THUMPD3Q9BV44 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
THUMPD3Q9BV44 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
THUMPD3Q9BV44 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
THUMPD3Q9BV44 BX005040.4-201ENST00000637145 1518 ntBASIC19.56■□□□□ 0.72
THUMPD3Q9BV44 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
THUMPD3Q9BV44 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
THUMPD3Q9BV44 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.55■□□□□ 0.72
THUMPD3Q9BV44 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
THUMPD3Q9BV44 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
THUMPD3Q9BV44 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.55■□□□□ 0.72
THUMPD3Q9BV44 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
THUMPD3Q9BV44 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
THUMPD3Q9BV44 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
THUMPD3Q9BV44 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.55■□□□□ 0.72
THUMPD3Q9BV44 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
THUMPD3Q9BV44 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.55■□□□□ 0.72
THUMPD3Q9BV44 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
THUMPD3Q9BV44 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
THUMPD3Q9BV44 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
THUMPD3Q9BV44 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
THUMPD3Q9BV44 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
THUMPD3Q9BV44 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.54■□□□□ 0.72
THUMPD3Q9BV44 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.54■□□□□ 0.72
THUMPD3Q9BV44 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
THUMPD3Q9BV44 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.54■□□□□ 0.72
THUMPD3Q9BV44 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
THUMPD3Q9BV44 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
THUMPD3Q9BV44 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
THUMPD3Q9BV44 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
THUMPD3Q9BV44 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.54■□□□□ 0.72
THUMPD3Q9BV44 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.54■□□□□ 0.72
THUMPD3Q9BV44 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.54■□□□□ 0.72
THUMPD3Q9BV44 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
THUMPD3Q9BV44 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.54■□□□□ 0.72
THUMPD3Q9BV44 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.54■□□□□ 0.72
THUMPD3Q9BV44 AL512408.1-201ENST00000569378 2000 ntBASIC19.54■□□□□ 0.72
THUMPD3Q9BV44 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.54■□□□□ 0.72
THUMPD3Q9BV44 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.54■□□□□ 0.72
THUMPD3Q9BV44 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
THUMPD3Q9BV44 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
THUMPD3Q9BV44 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
THUMPD3Q9BV44 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
THUMPD3Q9BV44 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.53■□□□□ 0.72
THUMPD3Q9BV44 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
THUMPD3Q9BV44 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.53■□□□□ 0.72
THUMPD3Q9BV44 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
THUMPD3Q9BV44 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
THUMPD3Q9BV44 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
THUMPD3Q9BV44 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.53■□□□□ 0.72
THUMPD3Q9BV44 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
THUMPD3Q9BV44 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
THUMPD3Q9BV44 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.53■□□□□ 0.72
THUMPD3Q9BV44 AC011484.1-201ENST00000377652 1995 ntBASIC19.53■□□□□ 0.72
THUMPD3Q9BV44 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
THUMPD3Q9BV44 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.53■□□□□ 0.72
THUMPD3Q9BV44 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.53■□□□□ 0.72
THUMPD3Q9BV44 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
THUMPD3Q9BV44 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
THUMPD3Q9BV44 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.53■□□□□ 0.72
THUMPD3Q9BV44 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
THUMPD3Q9BV44 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
THUMPD3Q9BV44 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.52■□□□□ 0.72
THUMPD3Q9BV44 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
THUMPD3Q9BV44 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
THUMPD3Q9BV44 AC007952.6-201ENST00000573168 2673 ntBASIC19.52■□□□□ 0.72
THUMPD3Q9BV44 AC003957.1-201ENST00000625108 2673 ntBASIC19.52■□□□□ 0.72
THUMPD3Q9BV44 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.52■□□□□ 0.72
THUMPD3Q9BV44 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
THUMPD3Q9BV44 IRS3P-201ENST00000223076 1006 ntBASIC19.52■□□□□ 0.72
THUMPD3Q9BV44 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
THUMPD3Q9BV44 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
THUMPD3Q9BV44 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.52■□□□□ 0.72
THUMPD3Q9BV44 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.52■□□□□ 0.72
THUMPD3Q9BV44 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
THUMPD3Q9BV44 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
THUMPD3Q9BV44 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
THUMPD3Q9BV44 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
THUMPD3Q9BV44 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.52■□□□□ 0.72
THUMPD3Q9BV44 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
THUMPD3Q9BV44 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
THUMPD3Q9BV44 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
THUMPD3Q9BV44 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
THUMPD3Q9BV44 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.51■□□□□ 0.71
THUMPD3Q9BV44 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
THUMPD3Q9BV44 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
THUMPD3Q9BV44 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.51■□□□□ 0.71
THUMPD3Q9BV44 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.51■□□□□ 0.71
THUMPD3Q9BV44 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
THUMPD3Q9BV44 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms