Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
TRGV9Q99603 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRGV9Q99603 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC15.99■□□□□ 0.15
TRGV9Q99603 AL391422.3-201ENST00000603791 2761 ntBASIC15.99■□□□□ 0.15
TRGV9Q99603 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRGV9Q99603 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRGV9Q99603 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRGV9Q99603 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRGV9Q99603 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC15.99■□□□□ 0.15
TRGV9Q99603 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC15.99■□□□□ 0.15
TRGV9Q99603 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
TRGV9Q99603 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC15.99■□□□□ 0.15
TRGV9Q99603 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRGV9Q99603 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC15.99■□□□□ 0.15
TRGV9Q99603 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRGV9Q99603 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRGV9Q99603 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRGV9Q99603 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRGV9Q99603 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
TRGV9Q99603 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC15.99■□□□□ 0.15
TRGV9Q99603 AL031432.3-201ENST00000607698 485 ntBASIC15.99■□□□□ 0.15
TRGV9Q99603 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRGV9Q99603 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRGV9Q99603 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRGV9Q99603 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRGV9Q99603 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRGV9Q99603 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
TRGV9Q99603 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
TRGV9Q99603 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
TRGV9Q99603 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRGV9Q99603 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC15.98■□□□□ 0.15
TRGV9Q99603 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRGV9Q99603 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC15.98■□□□□ 0.15
TRGV9Q99603 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRGV9Q99603 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRGV9Q99603 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC15.98■□□□□ 0.15
TRGV9Q99603 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
TRGV9Q99603 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRGV9Q99603 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC15.98■□□□□ 0.15
TRGV9Q99603 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC15.98■□□□□ 0.15
TRGV9Q99603 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC15.98■□□□□ 0.15
TRGV9Q99603 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRGV9Q99603 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC15.98■□□□□ 0.15
TRGV9Q99603 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
TRGV9Q99603 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRGV9Q99603 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRGV9Q99603 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRGV9Q99603 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC15.97■□□□□ 0.15
TRGV9Q99603 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
TRGV9Q99603 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRGV9Q99603 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
TRGV9Q99603 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC15.97■□□□□ 0.15
TRGV9Q99603 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
TRGV9Q99603 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRGV9Q99603 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRGV9Q99603 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRGV9Q99603 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC15.97■□□□□ 0.15
TRGV9Q99603 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC15.97■□□□□ 0.15
TRGV9Q99603 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
TRGV9Q99603 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRGV9Q99603 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRGV9Q99603 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
TRGV9Q99603 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRGV9Q99603 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRGV9Q99603 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRGV9Q99603 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRGV9Q99603 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRGV9Q99603 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
TRGV9Q99603 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRGV9Q99603 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRGV9Q99603 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRGV9Q99603 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRGV9Q99603 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRGV9Q99603 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRGV9Q99603 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC15.96■□□□□ 0.15
TRGV9Q99603 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRGV9Q99603 SERP1-208ENST00000491660 830 ntTSL 2 BASIC15.96■□□□□ 0.15
TRGV9Q99603 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC15.96■□□□□ 0.15
TRGV9Q99603 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRGV9Q99603 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRGV9Q99603 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRGV9Q99603 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC15.96■□□□□ 0.15
TRGV9Q99603 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRGV9Q99603 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC15.96■□□□□ 0.14
TRGV9Q99603 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
TRGV9Q99603 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
TRGV9Q99603 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRGV9Q99603 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRGV9Q99603 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRGV9Q99603 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
TRGV9Q99603 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
TRGV9Q99603 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
TRGV9Q99603 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRGV9Q99603 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRGV9Q99603 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC15.95■□□□□ 0.14
TRGV9Q99603 NME4-202ENST00000382940 766 ntTSL 3 BASIC15.95■□□□□ 0.14
TRGV9Q99603 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRGV9Q99603 SUDS3P1-201ENST00000505831 966 ntBASIC15.95■□□□□ 0.14
TRGV9Q99603 NME4-211ENST00000620944 1193 ntTSL 2 BASIC15.95■□□□□ 0.14
TRGV9Q99603 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms