Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.68■□□□□ 0.74
VPS33AQ96AX1 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VPS33AQ96AX1 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VPS33AQ96AX1 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VPS33AQ96AX1 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VPS33AQ96AX1 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
VPS33AQ96AX1 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.68■□□□□ 0.74
VPS33AQ96AX1 AC027682.1-201ENST00000562846 899 ntBASIC19.68■□□□□ 0.74
VPS33AQ96AX1 EEF1DP3-203ENST00000566025 782 ntBASIC19.68■□□□□ 0.74
VPS33AQ96AX1 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.68■□□□□ 0.74
VPS33AQ96AX1 AC131212.1-201ENST00000613771 668 ntBASIC19.68■□□□□ 0.74
VPS33AQ96AX1 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
VPS33AQ96AX1 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
VPS33AQ96AX1 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
VPS33AQ96AX1 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.68■□□□□ 0.74
VPS33AQ96AX1 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VPS33AQ96AX1 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
VPS33AQ96AX1 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VPS33AQ96AX1 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
VPS33AQ96AX1 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VPS33AQ96AX1 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.67■□□□□ 0.74
VPS33AQ96AX1 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VPS33AQ96AX1 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.67■□□□□ 0.74
VPS33AQ96AX1 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
VPS33AQ96AX1 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VPS33AQ96AX1 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.67■□□□□ 0.74
VPS33AQ96AX1 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
VPS33AQ96AX1 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
VPS33AQ96AX1 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
VPS33AQ96AX1 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.67■□□□□ 0.74
VPS33AQ96AX1 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
VPS33AQ96AX1 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
VPS33AQ96AX1 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
VPS33AQ96AX1 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
VPS33AQ96AX1 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VPS33AQ96AX1 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VPS33AQ96AX1 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VPS33AQ96AX1 AP004607.4-201ENST00000530158 1459 ntBASIC19.67■□□□□ 0.74
VPS33AQ96AX1 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
VPS33AQ96AX1 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
VPS33AQ96AX1 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VPS33AQ96AX1 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
VPS33AQ96AX1 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VPS33AQ96AX1 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
VPS33AQ96AX1 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
VPS33AQ96AX1 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.66■□□□□ 0.74
VPS33AQ96AX1 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.66■□□□□ 0.74
VPS33AQ96AX1 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VPS33AQ96AX1 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.66■□□□□ 0.74
VPS33AQ96AX1 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.66■□□□□ 0.74
VPS33AQ96AX1 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.66■□□□□ 0.74
VPS33AQ96AX1 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.66■□□□□ 0.74
VPS33AQ96AX1 AC053503.5-201ENST00000601508 636 ntBASIC19.66■□□□□ 0.74
VPS33AQ96AX1 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VPS33AQ96AX1 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
VPS33AQ96AX1 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.66■□□□□ 0.74
VPS33AQ96AX1 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VPS33AQ96AX1 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
VPS33AQ96AX1 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.66■□□□□ 0.74
VPS33AQ96AX1 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VPS33AQ96AX1 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VPS33AQ96AX1 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
VPS33AQ96AX1 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.65■□□□□ 0.74
VPS33AQ96AX1 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.65■□□□□ 0.74
VPS33AQ96AX1 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
VPS33AQ96AX1 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VPS33AQ96AX1 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VPS33AQ96AX1 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VPS33AQ96AX1 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VPS33AQ96AX1 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VPS33AQ96AX1 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
VPS33AQ96AX1 MIR572-201ENST00000384983 95 ntBASIC19.65■□□□□ 0.74
VPS33AQ96AX1 AC096631.2-201ENST00000436136 790 ntBASIC19.65■□□□□ 0.74
VPS33AQ96AX1 PBX2P1-201ENST00000493219 1291 ntBASIC19.65■□□□□ 0.74
VPS33AQ96AX1 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.65■□□□□ 0.74
VPS33AQ96AX1 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
VPS33AQ96AX1 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.65■□□□□ 0.74
VPS33AQ96AX1 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VPS33AQ96AX1 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
VPS33AQ96AX1 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VPS33AQ96AX1 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VPS33AQ96AX1 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.65■□□□□ 0.74
VPS33AQ96AX1 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
VPS33AQ96AX1 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VPS33AQ96AX1 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VPS33AQ96AX1 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VPS33AQ96AX1 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.64■□□□□ 0.74
VPS33AQ96AX1 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
VPS33AQ96AX1 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
VPS33AQ96AX1 AP001330.3-201ENST00000520123 633 ntBASIC19.64■□□□□ 0.73
VPS33AQ96AX1 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.64■□□□□ 0.73
VPS33AQ96AX1 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
VPS33AQ96AX1 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
VPS33AQ96AX1 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VPS33AQ96AX1 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
VPS33AQ96AX1 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
VPS33AQ96AX1 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.64■□□□□ 0.73
VPS33AQ96AX1 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
VPS33AQ96AX1 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.64■□□□□ 0.73
VPS33AQ96AX1 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms