Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTP4A1Q93096 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTP4A1Q93096 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.41■□□□□ 0.54
PTP4A1Q93096 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
PTP4A1Q93096 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.41■□□□□ 0.54
PTP4A1Q93096 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.41■□□□□ 0.54
PTP4A1Q93096 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PTP4A1Q93096 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.41■□□□□ 0.54
PTP4A1Q93096 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTP4A1Q93096 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTP4A1Q93096 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.41■□□□□ 0.54
PTP4A1Q93096 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PTP4A1Q93096 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
PTP4A1Q93096 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.41■□□□□ 0.54
PTP4A1Q93096 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.41■□□□□ 0.54
PTP4A1Q93096 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.41■□□□□ 0.54
PTP4A1Q93096 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
PTP4A1Q93096 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.41■□□□□ 0.54
PTP4A1Q93096 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PTP4A1Q93096 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PTP4A1Q93096 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTP4A1Q93096 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTP4A1Q93096 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTP4A1Q93096 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PTP4A1Q93096 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PTP4A1Q93096 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTP4A1Q93096 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.41■□□□□ 0.54
PTP4A1Q93096 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTP4A1Q93096 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PTP4A1Q93096 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.4■□□□□ 0.54
PTP4A1Q93096 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.4■□□□□ 0.54
PTP4A1Q93096 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PTP4A1Q93096 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.4■□□□□ 0.54
PTP4A1Q93096 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTP4A1Q93096 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PTP4A1Q93096 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.4■□□□□ 0.54
PTP4A1Q93096 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
PTP4A1Q93096 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTP4A1Q93096 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTP4A1Q93096 POU5F1P4-201ENST00000413175 1085 ntBASIC18.4■□□□□ 0.54
PTP4A1Q93096 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.4■□□□□ 0.54
PTP4A1Q93096 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.4■□□□□ 0.54
PTP4A1Q93096 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.4■□□□□ 0.54
PTP4A1Q93096 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PTP4A1Q93096 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.4■□□□□ 0.54
PTP4A1Q93096 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
PTP4A1Q93096 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTP4A1Q93096 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.39■□□□□ 0.53
PTP4A1Q93096 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTP4A1Q93096 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTP4A1Q93096 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
PTP4A1Q93096 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.39■□□□□ 0.53
PTP4A1Q93096 AC008175.2-201ENST00000612840 297 ntBASIC18.39■□□□□ 0.53
PTP4A1Q93096 RARRES2P11-201ENST00000635158 484 ntBASIC18.39■□□□□ 0.53
PTP4A1Q93096 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTP4A1Q93096 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PTP4A1Q93096 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PTP4A1Q93096 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
PTP4A1Q93096 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTP4A1Q93096 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
PTP4A1Q93096 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.39■□□□□ 0.53
PTP4A1Q93096 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTP4A1Q93096 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PTP4A1Q93096 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTP4A1Q93096 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTP4A1Q93096 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTP4A1Q93096 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.38■□□□□ 0.53
PTP4A1Q93096 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PTP4A1Q93096 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTP4A1Q93096 AC027612.3-201ENST00000413684 1047 ntBASIC18.38■□□□□ 0.53
PTP4A1Q93096 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.38■□□□□ 0.53
PTP4A1Q93096 MIR6084-201ENST00000622012 110 ntBASIC18.38■□□□□ 0.53
PTP4A1Q93096 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PTP4A1Q93096 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.38■□□□□ 0.53
PTP4A1Q93096 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.38■□□□□ 0.53
PTP4A1Q93096 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
PTP4A1Q93096 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTP4A1Q93096 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.38■□□□□ 0.53
PTP4A1Q93096 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTP4A1Q93096 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTP4A1Q93096 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTP4A1Q93096 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTP4A1Q93096 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PTP4A1Q93096 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PTP4A1Q93096 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTP4A1Q93096 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.37■□□□□ 0.53
PTP4A1Q93096 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.37■□□□□ 0.53
PTP4A1Q93096 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PTP4A1Q93096 AC092720.2-201ENST00000602388 1665 ntBASIC18.37■□□□□ 0.53
PTP4A1Q93096 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.37■□□□□ 0.53
PTP4A1Q93096 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
PTP4A1Q93096 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PTP4A1Q93096 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PTP4A1Q93096 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.36■□□□□ 0.53
PTP4A1Q93096 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTP4A1Q93096 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PTP4A1Q93096 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PTP4A1Q93096 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.36■□□□□ 0.53
PTP4A1Q93096 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PTP4A1Q93096 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms