Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.07■□□□□ 0.48
USP9XQ93008 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
USP9XQ93008 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.07■□□□□ 0.48
USP9XQ93008 AC007322.3-201ENST00000426526 701 ntBASIC18.07■□□□□ 0.48
USP9XQ93008 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
USP9XQ93008 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
USP9XQ93008 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP9XQ93008 AC087742.1-201ENST00000575880 1738 ntBASIC18.06■□□□□ 0.48
USP9XQ93008 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP9XQ93008 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP9XQ93008 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
USP9XQ93008 AL353807.1-201ENST00000427475 662 ntBASIC18.06■□□□□ 0.48
USP9XQ93008 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.06■□□□□ 0.48
USP9XQ93008 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP9XQ93008 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.06■□□□□ 0.48
USP9XQ93008 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP9XQ93008 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
USP9XQ93008 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
USP9XQ93008 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP9XQ93008 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP9XQ93008 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.06■□□□□ 0.48
USP9XQ93008 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
USP9XQ93008 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.06■□□□□ 0.48
USP9XQ93008 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.06■□□□□ 0.48
USP9XQ93008 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
USP9XQ93008 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP9XQ93008 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
USP9XQ93008 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
USP9XQ93008 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP9XQ93008 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
USP9XQ93008 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP9XQ93008 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
USP9XQ93008 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP9XQ93008 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP9XQ93008 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.05■□□□□ 0.48
USP9XQ93008 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC18.05■□□□□ 0.48
USP9XQ93008 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
USP9XQ93008 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.05■□□□□ 0.48
USP9XQ93008 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
USP9XQ93008 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.05■□□□□ 0.48
USP9XQ93008 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.05■□□□□ 0.48
USP9XQ93008 MYC-208ENST00000641036 567 ntBASIC18.05■□□□□ 0.48
USP9XQ93008 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP9XQ93008 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP9XQ93008 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
USP9XQ93008 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP9XQ93008 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
USP9XQ93008 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
USP9XQ93008 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP9XQ93008 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
USP9XQ93008 PREB-202ENST00000406567 1910 ntTSL 5 BASIC18.04■□□□□ 0.48
USP9XQ93008 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP9XQ93008 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP9XQ93008 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.04■□□□□ 0.48
USP9XQ93008 AC006557.6-201ENST00000623071 864 ntBASIC18.04■□□□□ 0.48
USP9XQ93008 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP9XQ93008 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
USP9XQ93008 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
USP9XQ93008 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP9XQ93008 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP9XQ93008 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP9XQ93008 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
USP9XQ93008 AC104076.2-201ENST00000448912 469 ntBASIC18.04■□□□□ 0.48
USP9XQ93008 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.04■□□□□ 0.48
USP9XQ93008 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.04■□□□□ 0.48
USP9XQ93008 AC004263.2-201ENST00000617183 678 ntBASIC18.04■□□□□ 0.48
USP9XQ93008 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.04■□□□□ 0.48
USP9XQ93008 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
USP9XQ93008 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.03■□□□□ 0.48
USP9XQ93008 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.03■□□□□ 0.48
USP9XQ93008 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
USP9XQ93008 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
USP9XQ93008 FITM1-202ENST00000559294 800 ntBASIC18.03■□□□□ 0.48
USP9XQ93008 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC18.03■□□□□ 0.48
USP9XQ93008 AC023511.2-201ENST00000618803 211 ntBASIC18.03■□□□□ 0.48
USP9XQ93008 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC18.03■□□□□ 0.48
USP9XQ93008 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
USP9XQ93008 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.03■□□□□ 0.48
USP9XQ93008 AC009947.2-201ENST00000444014 672 ntBASIC18.03■□□□□ 0.48
USP9XQ93008 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.03■□□□□ 0.48
USP9XQ93008 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.03■□□□□ 0.48
USP9XQ93008 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC18.03■□□□□ 0.48
USP9XQ93008 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
USP9XQ93008 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
USP9XQ93008 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.03■□□□□ 0.48
USP9XQ93008 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.02■□□□□ 0.48
USP9XQ93008 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
USP9XQ93008 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
USP9XQ93008 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.02■□□□□ 0.48
USP9XQ93008 AC006011.2-201ENST00000621313 1158 ntBASIC18.02■□□□□ 0.48
USP9XQ93008 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
USP9XQ93008 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
USP9XQ93008 AL137013.1-201ENST00000432946 1228 ntBASIC18.02■□□□□ 0.47
USP9XQ93008 KRT18P48-201ENST00000434763 852 ntBASIC18.02■□□□□ 0.47
USP9XQ93008 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.02■□□□□ 0.47
USP9XQ93008 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
USP9XQ93008 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.02■□□□□ 0.47
USP9XQ93008 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
USP9XQ93008 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.02■□□□□ 0.47
USP9XQ93008 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms