Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.94■□□□□ 0.94
SCG3Q8WXD2 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.94■□□□□ 0.94
SCG3Q8WXD2 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SCG3Q8WXD2 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
SCG3Q8WXD2 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
SCG3Q8WXD2 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.93■□□□□ 0.94
SCG3Q8WXD2 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SCG3Q8WXD2 AL049796.1-201ENST00000565336 1766 ntBASIC20.93■□□□□ 0.94
SCG3Q8WXD2 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SCG3Q8WXD2 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SCG3Q8WXD2 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SCG3Q8WXD2 AC231657.2-201ENST00000624556 255 ntBASIC20.93■□□□□ 0.94
SCG3Q8WXD2 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SCG3Q8WXD2 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SCG3Q8WXD2 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SCG3Q8WXD2 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
SCG3Q8WXD2 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
SCG3Q8WXD2 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.92■□□□□ 0.94
SCG3Q8WXD2 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SCG3Q8WXD2 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SCG3Q8WXD2 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SCG3Q8WXD2 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
SCG3Q8WXD2 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SCG3Q8WXD2 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
SCG3Q8WXD2 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SCG3Q8WXD2 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.92■□□□□ 0.94
SCG3Q8WXD2 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.92■□□□□ 0.94
SCG3Q8WXD2 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SCG3Q8WXD2 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
SCG3Q8WXD2 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SCG3Q8WXD2 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.92■□□□□ 0.94
SCG3Q8WXD2 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.92■□□□□ 0.94
SCG3Q8WXD2 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SCG3Q8WXD2 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SCG3Q8WXD2 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SCG3Q8WXD2 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SCG3Q8WXD2 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
SCG3Q8WXD2 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
SCG3Q8WXD2 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SCG3Q8WXD2 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.91■□□□□ 0.94
SCG3Q8WXD2 CROCCP5-201ENST00000436658 830 ntBASIC20.91■□□□□ 0.94
SCG3Q8WXD2 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.91■□□□□ 0.94
SCG3Q8WXD2 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SCG3Q8WXD2 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.91■□□□□ 0.94
SCG3Q8WXD2 KRT18P20-201ENST00000548986 1279 ntBASIC20.91■□□□□ 0.94
SCG3Q8WXD2 MFSD11-216ENST00000590393 1141 ntBASIC20.91■□□□□ 0.94
SCG3Q8WXD2 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.91■□□□□ 0.94
SCG3Q8WXD2 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SCG3Q8WXD2 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SCG3Q8WXD2 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCG3Q8WXD2 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.9■□□□□ 0.94
SCG3Q8WXD2 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.9■□□□□ 0.94
SCG3Q8WXD2 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
SCG3Q8WXD2 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCG3Q8WXD2 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCG3Q8WXD2 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.9■□□□□ 0.94
SCG3Q8WXD2 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SCG3Q8WXD2 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.9■□□□□ 0.94
SCG3Q8WXD2 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCG3Q8WXD2 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCG3Q8WXD2 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
SCG3Q8WXD2 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
SCG3Q8WXD2 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.9■□□□□ 0.94
SCG3Q8WXD2 UBE2DNL-204ENST00000602536 740 ntBASIC20.9■□□□□ 0.94
SCG3Q8WXD2 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.9■□□□□ 0.94
SCG3Q8WXD2 AL109923.1-201ENST00000618799 583 ntBASIC20.9■□□□□ 0.94
SCG3Q8WXD2 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCG3Q8WXD2 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.9■□□□□ 0.94
SCG3Q8WXD2 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCG3Q8WXD2 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SCG3Q8WXD2 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
SCG3Q8WXD2 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
SCG3Q8WXD2 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.89■□□□□ 0.94
SCG3Q8WXD2 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.89■□□□□ 0.93
SCG3Q8WXD2 MIR663A-201ENST00000385250 93 ntBASIC20.89■□□□□ 0.93
SCG3Q8WXD2 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SCG3Q8WXD2 AC007322.1-201ENST00000426983 750 ntBASIC20.89■□□□□ 0.93
SCG3Q8WXD2 NCF1B-203ENST00000435988 1254 ntBASIC20.89■□□□□ 0.93
SCG3Q8WXD2 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.89■□□□□ 0.93
SCG3Q8WXD2 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
SCG3Q8WXD2 AC138907.5-202ENST00000569484 235 ntBASIC20.89■□□□□ 0.93
SCG3Q8WXD2 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.89■□□□□ 0.93
SCG3Q8WXD2 MYCNOS-205ENST00000641950 531 ntBASIC20.89■□□□□ 0.93
SCG3Q8WXD2 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SCG3Q8WXD2 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SCG3Q8WXD2 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SCG3Q8WXD2 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SCG3Q8WXD2 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
SCG3Q8WXD2 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.89■□□□□ 0.93
SCG3Q8WXD2 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SCG3Q8WXD2 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.88■□□□□ 0.93
SCG3Q8WXD2 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SCG3Q8WXD2 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.88■□□□□ 0.93
SCG3Q8WXD2 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SCG3Q8WXD2 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
SCG3Q8WXD2 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SCG3Q8WXD2 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.88■□□□□ 0.93
SCG3Q8WXD2 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.88■□□□□ 0.93
SCG3Q8WXD2 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.88■□□□□ 0.93
SCG3Q8WXD2 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms