Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.36■□□□□ 0.85
CKAP2Q8WWK9 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CKAP2Q8WWK9 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CKAP2Q8WWK9 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.36■□□□□ 0.85
CKAP2Q8WWK9 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CKAP2Q8WWK9 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.36■□□□□ 0.85
CKAP2Q8WWK9 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CKAP2Q8WWK9 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CKAP2Q8WWK9 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CKAP2Q8WWK9 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
CKAP2Q8WWK9 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CKAP2Q8WWK9 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
CKAP2Q8WWK9 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CKAP2Q8WWK9 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CKAP2Q8WWK9 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.35■□□□□ 0.85
CKAP2Q8WWK9 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CKAP2Q8WWK9 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CKAP2Q8WWK9 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CKAP2Q8WWK9 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
CKAP2Q8WWK9 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CKAP2Q8WWK9 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.35■□□□□ 0.85
CKAP2Q8WWK9 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.35■□□□□ 0.85
CKAP2Q8WWK9 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.35■□□□□ 0.85
CKAP2Q8WWK9 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CKAP2Q8WWK9 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CKAP2Q8WWK9 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CKAP2Q8WWK9 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CKAP2Q8WWK9 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CKAP2Q8WWK9 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CKAP2Q8WWK9 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CKAP2Q8WWK9 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.35■□□□□ 0.85
CKAP2Q8WWK9 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CKAP2Q8WWK9 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CKAP2Q8WWK9 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CKAP2Q8WWK9 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CKAP2Q8WWK9 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CKAP2Q8WWK9 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CKAP2Q8WWK9 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
CKAP2Q8WWK9 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.34■□□□□ 0.85
CKAP2Q8WWK9 UNC93B8-201ENST00000511903 705 ntBASIC20.34■□□□□ 0.85
CKAP2Q8WWK9 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CKAP2Q8WWK9 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CKAP2Q8WWK9 AC092171.4-201ENST00000609130 632 ntBASIC20.34■□□□□ 0.85
CKAP2Q8WWK9 AL035685.1-201ENST00000636663 812 ntBASIC20.34■□□□□ 0.85
CKAP2Q8WWK9 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.34■□□□□ 0.85
CKAP2Q8WWK9 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CKAP2Q8WWK9 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CKAP2Q8WWK9 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CKAP2Q8WWK9 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CKAP2Q8WWK9 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.34■□□□□ 0.85
CKAP2Q8WWK9 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CKAP2Q8WWK9 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CKAP2Q8WWK9 SYT6-210ENST00000641643 1587 ntBASIC20.34■□□□□ 0.85
CKAP2Q8WWK9 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CKAP2Q8WWK9 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
CKAP2Q8WWK9 SLC47A1P1-202ENST00000449666 945 ntBASIC20.33■□□□□ 0.85
CKAP2Q8WWK9 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.33■□□□□ 0.85
CKAP2Q8WWK9 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.33■□□□□ 0.85
CKAP2Q8WWK9 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.33■□□□□ 0.85
CKAP2Q8WWK9 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.33■□□□□ 0.85
CKAP2Q8WWK9 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.33■□□□□ 0.84
CKAP2Q8WWK9 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CKAP2Q8WWK9 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
CKAP2Q8WWK9 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CKAP2Q8WWK9 AC055733.4-201ENST00000638462 1354 ntBASIC20.33■□□□□ 0.84
CKAP2Q8WWK9 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CKAP2Q8WWK9 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CKAP2Q8WWK9 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CKAP2Q8WWK9 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CKAP2Q8WWK9 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.32■□□□□ 0.84
CKAP2Q8WWK9 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.32■□□□□ 0.84
CKAP2Q8WWK9 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CKAP2Q8WWK9 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CKAP2Q8WWK9 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CKAP2Q8WWK9 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CKAP2Q8WWK9 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
CKAP2Q8WWK9 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.32■□□□□ 0.84
CKAP2Q8WWK9 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CKAP2Q8WWK9 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
CKAP2Q8WWK9 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.32■□□□□ 0.84
CKAP2Q8WWK9 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.32■□□□□ 0.84
CKAP2Q8WWK9 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CKAP2Q8WWK9 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CKAP2Q8WWK9 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CKAP2Q8WWK9 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.32■□□□□ 0.84
CKAP2Q8WWK9 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CKAP2Q8WWK9 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CKAP2Q8WWK9 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CKAP2Q8WWK9 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
CKAP2Q8WWK9 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.31■□□□□ 0.84
CKAP2Q8WWK9 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.31■□□□□ 0.84
CKAP2Q8WWK9 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.31■□□□□ 0.84
CKAP2Q8WWK9 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CKAP2Q8WWK9 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CKAP2Q8WWK9 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CKAP2Q8WWK9 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CKAP2Q8WWK9 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CKAP2Q8WWK9 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CKAP2Q8WWK9 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CKAP2Q8WWK9 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms