Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMIM4Q8WVI0 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMIM4Q8WVI0 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.53■□□□□ 0.4
SMIM4Q8WVI0 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SMIM4Q8WVI0 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMIM4Q8WVI0 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SMIM4Q8WVI0 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMIM4Q8WVI0 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
SMIM4Q8WVI0 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SMIM4Q8WVI0 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.53■□□□□ 0.4
SMIM4Q8WVI0 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMIM4Q8WVI0 LSM4-201ENST00000252816 986 ntTSL 2 BASIC17.53■□□□□ 0.4
SMIM4Q8WVI0 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMIM4Q8WVI0 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SMIM4Q8WVI0 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMIM4Q8WVI0 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SMIM4Q8WVI0 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMIM4Q8WVI0 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.4
SMIM4Q8WVI0 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMIM4Q8WVI0 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
SMIM4Q8WVI0 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.52■□□□□ 0.4
SMIM4Q8WVI0 KRT125P-201ENST00000546827 989 ntBASIC17.52■□□□□ 0.4
SMIM4Q8WVI0 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.52■□□□□ 0.4
SMIM4Q8WVI0 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMIM4Q8WVI0 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
SMIM4Q8WVI0 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.52■□□□□ 0.4
SMIM4Q8WVI0 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.39
SMIM4Q8WVI0 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SMIM4Q8WVI0 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SMIM4Q8WVI0 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
SMIM4Q8WVI0 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SMIM4Q8WVI0 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SMIM4Q8WVI0 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMIM4Q8WVI0 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMIM4Q8WVI0 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMIM4Q8WVI0 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SMIM4Q8WVI0 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMIM4Q8WVI0 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SMIM4Q8WVI0 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
SMIM4Q8WVI0 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
SMIM4Q8WVI0 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMIM4Q8WVI0 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMIM4Q8WVI0 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC17.51■□□□□ 0.39
SMIM4Q8WVI0 AC099791.2-201ENST00000605725 427 ntBASIC17.51■□□□□ 0.39
SMIM4Q8WVI0 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMIM4Q8WVI0 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMIM4Q8WVI0 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMIM4Q8WVI0 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SMIM4Q8WVI0 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMIM4Q8WVI0 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.51■□□□□ 0.39
SMIM4Q8WVI0 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMIM4Q8WVI0 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
SMIM4Q8WVI0 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMIM4Q8WVI0 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMIM4Q8WVI0 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.5■□□□□ 0.39
SMIM4Q8WVI0 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.5■□□□□ 0.39
SMIM4Q8WVI0 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
SMIM4Q8WVI0 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.5■□□□□ 0.39
SMIM4Q8WVI0 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SMIM4Q8WVI0 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SMIM4Q8WVI0 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMIM4Q8WVI0 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SMIM4Q8WVI0 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
SMIM4Q8WVI0 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMIM4Q8WVI0 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SMIM4Q8WVI0 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMIM4Q8WVI0 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.49■□□□□ 0.39
SMIM4Q8WVI0 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMIM4Q8WVI0 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
SMIM4Q8WVI0 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
SMIM4Q8WVI0 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMIM4Q8WVI0 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.49■□□□□ 0.39
SMIM4Q8WVI0 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.49■□□□□ 0.39
SMIM4Q8WVI0 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC17.49■□□□□ 0.39
SMIM4Q8WVI0 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.49■□□□□ 0.39
SMIM4Q8WVI0 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
SMIM4Q8WVI0 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMIM4Q8WVI0 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.49■□□□□ 0.39
SMIM4Q8WVI0 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMIM4Q8WVI0 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.49■□□□□ 0.39
SMIM4Q8WVI0 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMIM4Q8WVI0 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SMIM4Q8WVI0 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC17.49■□□□□ 0.39
SMIM4Q8WVI0 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SMIM4Q8WVI0 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
SMIM4Q8WVI0 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMIM4Q8WVI0 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SMIM4Q8WVI0 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMIM4Q8WVI0 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.49■□□□□ 0.39
SMIM4Q8WVI0 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.49■□□□□ 0.39
SMIM4Q8WVI0 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMIM4Q8WVI0 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.49■□□□□ 0.39
SMIM4Q8WVI0 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMIM4Q8WVI0 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SMIM4Q8WVI0 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMIM4Q8WVI0 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMIM4Q8WVI0 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMIM4Q8WVI0 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
SMIM4Q8WVI0 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SMIM4Q8WVI0 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms