Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC25.2■■□□□ 1.62
SNED1Q8TER0 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
SNED1Q8TER0 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
SNED1Q8TER0 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
SNED1Q8TER0 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC25.2■■□□□ 1.62
SNED1Q8TER0 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC25.2■■□□□ 1.62
SNED1Q8TER0 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
SNED1Q8TER0 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
SNED1Q8TER0 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.62
SNED1Q8TER0 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
SNED1Q8TER0 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
SNED1Q8TER0 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC25.19■■□□□ 1.62
SNED1Q8TER0 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC25.19■■□□□ 1.62
SNED1Q8TER0 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
SNED1Q8TER0 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
SNED1Q8TER0 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
SNED1Q8TER0 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
SNED1Q8TER0 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC25.19■■□□□ 1.62
SNED1Q8TER0 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC25.19■■□□□ 1.62
SNED1Q8TER0 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC25.19■■□□□ 1.62
SNED1Q8TER0 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC25.19■■□□□ 1.62
SNED1Q8TER0 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC25.18■■□□□ 1.62
SNED1Q8TER0 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
SNED1Q8TER0 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
SNED1Q8TER0 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
SNED1Q8TER0 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
SNED1Q8TER0 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC25.18■■□□□ 1.62
SNED1Q8TER0 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
SNED1Q8TER0 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
SNED1Q8TER0 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
SNED1Q8TER0 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
SNED1Q8TER0 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
SNED1Q8TER0 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC25.18■■□□□ 1.62
SNED1Q8TER0 GRAP-204ENST00000573099 846 ntTSL 3 BASIC25.18■■□□□ 1.62
SNED1Q8TER0 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC25.17■■□□□ 1.62
SNED1Q8TER0 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
SNED1Q8TER0 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
SNED1Q8TER0 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
SNED1Q8TER0 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC25.17■■□□□ 1.62
SNED1Q8TER0 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC25.17■■□□□ 1.62
SNED1Q8TER0 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
SNED1Q8TER0 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SNED1Q8TER0 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC25.17■■□□□ 1.62
SNED1Q8TER0 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC25.17■■□□□ 1.62
SNED1Q8TER0 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
SNED1Q8TER0 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC25.17■■□□□ 1.62
SNED1Q8TER0 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC25.17■■□□□ 1.62
SNED1Q8TER0 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC25.17■■□□□ 1.62
SNED1Q8TER0 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
SNED1Q8TER0 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC25.17■■□□□ 1.62
SNED1Q8TER0 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC25.17■■□□□ 1.62
SNED1Q8TER0 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC25.17■■□□□ 1.62
SNED1Q8TER0 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC25.17■■□□□ 1.62
SNED1Q8TER0 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
SNED1Q8TER0 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
SNED1Q8TER0 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SNED1Q8TER0 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
SNED1Q8TER0 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC25.16■■□□□ 1.62
SNED1Q8TER0 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
SNED1Q8TER0 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC25.16■■□□□ 1.62
SNED1Q8TER0 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC25.16■■□□□ 1.62
SNED1Q8TER0 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC25.16■■□□□ 1.62
SNED1Q8TER0 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC25.16■■□□□ 1.62
SNED1Q8TER0 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
SNED1Q8TER0 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC25.16■■□□□ 1.62
SNED1Q8TER0 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
SNED1Q8TER0 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC25.16■■□□□ 1.62
SNED1Q8TER0 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC25.16■■□□□ 1.62
SNED1Q8TER0 PRKY-204ENST00000533551 1019 ntBASIC25.16■■□□□ 1.62
SNED1Q8TER0 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC25.16■■□□□ 1.62
SNED1Q8TER0 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC25.16■■□□□ 1.62
SNED1Q8TER0 AP001412.1-201ENST00000608405 714 ntBASIC25.16■■□□□ 1.62
SNED1Q8TER0 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC25.16■■□□□ 1.62
SNED1Q8TER0 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
SNED1Q8TER0 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
SNED1Q8TER0 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC25.16■■□□□ 1.62
SNED1Q8TER0 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SNED1Q8TER0 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SNED1Q8TER0 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
SNED1Q8TER0 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC25.15■■□□□ 1.62
SNED1Q8TER0 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
SNED1Q8TER0 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC25.15■■□□□ 1.62
SNED1Q8TER0 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SNED1Q8TER0 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC25.15■■□□□ 1.62
SNED1Q8TER0 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC25.15■■□□□ 1.62
SNED1Q8TER0 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC25.15■■□□□ 1.62
SNED1Q8TER0 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC25.15■■□□□ 1.62
SNED1Q8TER0 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC25.15■■□□□ 1.62
SNED1Q8TER0 AC006557.6-201ENST00000623071 864 ntBASIC25.15■■□□□ 1.62
SNED1Q8TER0 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SNED1Q8TER0 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
SNED1Q8TER0 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
SNED1Q8TER0 GALC-202ENST00000393568 2054 ntTSL 2 BASIC25.15■■□□□ 1.62
SNED1Q8TER0 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
SNED1Q8TER0 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC25.14■■□□□ 1.62
SNED1Q8TER0 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC25.14■■□□□ 1.62
SNED1Q8TER0 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
SNED1Q8TER0 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
SNED1Q8TER0 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC25.14■■□□□ 1.62
SNED1Q8TER0 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC25.14■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms