Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 PVT1_1.1-201ENST00000615125 194 ntBASIC13.33□□□□□ -0.28
SMIM11BQ8TCY0 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC13.33□□□□□ -0.28
SMIM11BQ8TCY0 AC090340.1-201ENST00000620778 4980 ntBASIC13.33□□□□□ -0.28
SMIM11BQ8TCY0 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SMIM11BQ8TCY0 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
SMIM11BQ8TCY0 AP004607.7-201ENST00000527152 1677 ntBASIC13.33□□□□□ -0.28
SMIM11BQ8TCY0 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
SMIM11BQ8TCY0 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
SMIM11BQ8TCY0 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC13.33□□□□□ -0.28
SMIM11BQ8TCY0 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SMIM11BQ8TCY0 STX5-203ENST00000394690 1568 ntTSL 5 BASIC13.32□□□□□ -0.28
SMIM11BQ8TCY0 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM11BQ8TCY0 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM11BQ8TCY0 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
SMIM11BQ8TCY0 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM11BQ8TCY0 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM11BQ8TCY0 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC13.32□□□□□ -0.28
SMIM11BQ8TCY0 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM11BQ8TCY0 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM11BQ8TCY0 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM11BQ8TCY0 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC13.32□□□□□ -0.28
SMIM11BQ8TCY0 RBM38-205ENST00000440234 686 ntTSL 2 BASIC13.32□□□□□ -0.28
SMIM11BQ8TCY0 CLTA-206ENST00000466396 695 ntTSL 2 BASIC13.32□□□□□ -0.28
SMIM11BQ8TCY0 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC13.32□□□□□ -0.28
SMIM11BQ8TCY0 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC13.32□□□□□ -0.28
SMIM11BQ8TCY0 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC13.32□□□□□ -0.28
SMIM11BQ8TCY0 MIR4449-201ENST00000578365 66 ntBASIC13.32□□□□□ -0.28
SMIM11BQ8TCY0 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC13.32□□□□□ -0.28
SMIM11BQ8TCY0 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC13.32□□□□□ -0.28
SMIM11BQ8TCY0 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM11BQ8TCY0 AC087239.1-201ENST00000622671 572 ntBASIC13.32□□□□□ -0.28
SMIM11BQ8TCY0 AC074183.2-201ENST00000623112 922 ntBASIC13.32□□□□□ -0.28
SMIM11BQ8TCY0 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM11BQ8TCY0 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC13.32□□□□□ -0.28
SMIM11BQ8TCY0 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM11BQ8TCY0 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM11BQ8TCY0 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM11BQ8TCY0 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
SMIM11BQ8TCY0 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM11BQ8TCY0 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
SMIM11BQ8TCY0 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM11BQ8TCY0 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM11BQ8TCY0 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM11BQ8TCY0 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM11BQ8TCY0 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
SMIM11BQ8TCY0 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC13.32□□□□□ -0.28
SMIM11BQ8TCY0 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM11BQ8TCY0 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SMIM11BQ8TCY0 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
SMIM11BQ8TCY0 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
SMIM11BQ8TCY0 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SMIM11BQ8TCY0 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
SMIM11BQ8TCY0 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SMIM11BQ8TCY0 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SMIM11BQ8TCY0 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
SMIM11BQ8TCY0 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SMIM11BQ8TCY0 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SMIM11BQ8TCY0 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC13.31□□□□□ -0.28
SMIM11BQ8TCY0 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SMIM11BQ8TCY0 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SMIM11BQ8TCY0 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SMIM11BQ8TCY0 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SMIM11BQ8TCY0 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC13.31□□□□□ -0.28
SMIM11BQ8TCY0 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SMIM11BQ8TCY0 GATM-206ENST00000558336 1522 ntTSL 2 BASIC13.31□□□□□ -0.28
SMIM11BQ8TCY0 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC13.31□□□□□ -0.28
SMIM11BQ8TCY0 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SMIM11BQ8TCY0 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
SMIM11BQ8TCY0 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
SMIM11BQ8TCY0 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
SMIM11BQ8TCY0 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC13.31□□□□□ -0.28
SMIM11BQ8TCY0 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
SMIM11BQ8TCY0 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SMIM11BQ8TCY0 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SMIM11BQ8TCY0 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SMIM11BQ8TCY0 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC13.31□□□□□ -0.28
SMIM11BQ8TCY0 AC125437.2-201ENST00000625180 2167 ntBASIC13.31□□□□□ -0.28
SMIM11BQ8TCY0 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SMIM11BQ8TCY0 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SMIM11BQ8TCY0 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SMIM11BQ8TCY0 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC13.31□□□□□ -0.28
SMIM11BQ8TCY0 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SMIM11BQ8TCY0 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SMIM11BQ8TCY0 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SMIM11BQ8TCY0 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SMIM11BQ8TCY0 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC13.3□□□□□ -0.28
SMIM11BQ8TCY0 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
SMIM11BQ8TCY0 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SMIM11BQ8TCY0 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC13.3□□□□□ -0.28
SMIM11BQ8TCY0 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SMIM11BQ8TCY0 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
SMIM11BQ8TCY0 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
SMIM11BQ8TCY0 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SMIM11BQ8TCY0 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC13.3□□□□□ -0.28
SMIM11BQ8TCY0 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SMIM11BQ8TCY0 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC13.3□□□□□ -0.28
SMIM11BQ8TCY0 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SMIM11BQ8TCY0 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SMIM11BQ8TCY0 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SMIM11BQ8TCY0 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms