Protein–RNA interactions for Protein: Q8N9W5

DNAAF3, Dynein assembly factor 3, axonemal, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF3Q8N9W5 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DNAAF3Q8N9W5 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
DNAAF3Q8N9W5 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.85■□□□□ 0.93
DNAAF3Q8N9W5 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
DNAAF3Q8N9W5 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
DNAAF3Q8N9W5 AP005212.1-201ENST00000581547 1997 ntBASIC20.85■□□□□ 0.93
DNAAF3Q8N9W5 AIRN-201ENST00000601203 4374 ntBASIC20.85■□□□□ 0.93
DNAAF3Q8N9W5 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
DNAAF3Q8N9W5 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
DNAAF3Q8N9W5 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
DNAAF3Q8N9W5 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
DNAAF3Q8N9W5 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
DNAAF3Q8N9W5 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
DNAAF3Q8N9W5 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.85■□□□□ 0.93
DNAAF3Q8N9W5 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
DNAAF3Q8N9W5 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.85■□□□□ 0.93
DNAAF3Q8N9W5 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
DNAAF3Q8N9W5 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
DNAAF3Q8N9W5 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
DNAAF3Q8N9W5 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.85■□□□□ 0.93
DNAAF3Q8N9W5 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DNAAF3Q8N9W5 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DNAAF3Q8N9W5 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
DNAAF3Q8N9W5 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.84■□□□□ 0.93
DNAAF3Q8N9W5 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DNAAF3Q8N9W5 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.84■□□□□ 0.93
DNAAF3Q8N9W5 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
DNAAF3Q8N9W5 GABARAPL3-202ENST00000624044 1851 ntBASIC20.84■□□□□ 0.93
DNAAF3Q8N9W5 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.84■□□□□ 0.93
DNAAF3Q8N9W5 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.84■□□□□ 0.93
DNAAF3Q8N9W5 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
DNAAF3Q8N9W5 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
DNAAF3Q8N9W5 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
DNAAF3Q8N9W5 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.84■□□□□ 0.93
DNAAF3Q8N9W5 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
DNAAF3Q8N9W5 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
DNAAF3Q8N9W5 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DNAAF3Q8N9W5 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.84■□□□□ 0.93
DNAAF3Q8N9W5 AC116050.2-201ENST00000612102 1779 ntBASIC20.84■□□□□ 0.93
DNAAF3Q8N9W5 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
DNAAF3Q8N9W5 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
DNAAF3Q8N9W5 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
DNAAF3Q8N9W5 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
DNAAF3Q8N9W5 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
DNAAF3Q8N9W5 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
DNAAF3Q8N9W5 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.83■□□□□ 0.93
DNAAF3Q8N9W5 AC027702.1-201ENST00000563810 1770 ntBASIC20.83■□□□□ 0.93
DNAAF3Q8N9W5 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.83■□□□□ 0.93
DNAAF3Q8N9W5 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
DNAAF3Q8N9W5 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.93
DNAAF3Q8N9W5 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
DNAAF3Q8N9W5 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.83■□□□□ 0.93
DNAAF3Q8N9W5 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
DNAAF3Q8N9W5 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.83■□□□□ 0.93
DNAAF3Q8N9W5 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
DNAAF3Q8N9W5 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.83■□□□□ 0.92
DNAAF3Q8N9W5 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
DNAAF3Q8N9W5 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
DNAAF3Q8N9W5 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
DNAAF3Q8N9W5 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.82■□□□□ 0.92
DNAAF3Q8N9W5 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.82■□□□□ 0.92
DNAAF3Q8N9W5 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DNAAF3Q8N9W5 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
DNAAF3Q8N9W5 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
DNAAF3Q8N9W5 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.82■□□□□ 0.92
DNAAF3Q8N9W5 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.82■□□□□ 0.92
DNAAF3Q8N9W5 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
DNAAF3Q8N9W5 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.82■□□□□ 0.92
DNAAF3Q8N9W5 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.82■□□□□ 0.92
DNAAF3Q8N9W5 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.82■□□□□ 0.92
DNAAF3Q8N9W5 AC097381.1-201ENST00000429019 1296 ntBASIC20.82■□□□□ 0.92
DNAAF3Q8N9W5 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.82■□□□□ 0.92
DNAAF3Q8N9W5 AC034268.1-201ENST00000441047 882 ntBASIC20.82■□□□□ 0.92
DNAAF3Q8N9W5 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.82■□□□□ 0.92
DNAAF3Q8N9W5 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.82■□□□□ 0.92
DNAAF3Q8N9W5 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.82■□□□□ 0.92
DNAAF3Q8N9W5 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
DNAAF3Q8N9W5 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
DNAAF3Q8N9W5 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DNAAF3Q8N9W5 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
DNAAF3Q8N9W5 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.82■□□□□ 0.92
DNAAF3Q8N9W5 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
DNAAF3Q8N9W5 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DNAAF3Q8N9W5 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.82■□□□□ 0.92
DNAAF3Q8N9W5 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DNAAF3Q8N9W5 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
DNAAF3Q8N9W5 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DNAAF3Q8N9W5 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
DNAAF3Q8N9W5 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
DNAAF3Q8N9W5 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DNAAF3Q8N9W5 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DNAAF3Q8N9W5 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
DNAAF3Q8N9W5 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
DNAAF3Q8N9W5 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.81■□□□□ 0.92
DNAAF3Q8N9W5 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
DNAAF3Q8N9W5 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
DNAAF3Q8N9W5 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.81■□□□□ 0.92
DNAAF3Q8N9W5 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.81■□□□□ 0.92
DNAAF3Q8N9W5 KRT18P61-201ENST00000585825 1298 ntBASIC20.81■□□□□ 0.92
DNAAF3Q8N9W5 NTF6G-201ENST00000591094 616 ntBASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms