Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC11.03□□□□□ -0.64
LCA10Q71F78 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LCA10Q71F78 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
LCA10Q71F78 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
LCA10Q71F78 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LCA10Q71F78 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC11.03□□□□□ -0.64
LCA10Q71F78 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC11.03□□□□□ -0.64
LCA10Q71F78 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LCA10Q71F78 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LCA10Q71F78 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LCA10Q71F78 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
LCA10Q71F78 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
LCA10Q71F78 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC11.03□□□□□ -0.64
LCA10Q71F78 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LCA10Q71F78 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC11.02□□□□□ -0.64
LCA10Q71F78 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
LCA10Q71F78 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
LCA10Q71F78 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
LCA10Q71F78 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
LCA10Q71F78 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
LCA10Q71F78 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
LCA10Q71F78 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.64
LCA10Q71F78 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
LCA10Q71F78 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
LCA10Q71F78 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
LCA10Q71F78 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
LCA10Q71F78 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LCA10Q71F78 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
LCA10Q71F78 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
LCA10Q71F78 MIR4281-201ENST00000580852 62 ntBASIC11.02□□□□□ -0.65
LCA10Q71F78 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LCA10Q71F78 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LCA10Q71F78 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LCA10Q71F78 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
LCA10Q71F78 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LCA10Q71F78 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LCA10Q71F78 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LCA10Q71F78 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
LCA10Q71F78 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LCA10Q71F78 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC11.02□□□□□ -0.65
LCA10Q71F78 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LCA10Q71F78 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
LCA10Q71F78 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC11.02□□□□□ -0.65
LCA10Q71F78 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC11.02□□□□□ -0.65
LCA10Q71F78 USF2-207ENST00000595068 1612 ntTSL 5 BASIC11.02□□□□□ -0.65
LCA10Q71F78 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LCA10Q71F78 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
LCA10Q71F78 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
LCA10Q71F78 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
LCA10Q71F78 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC11.01□□□□□ -0.65
LCA10Q71F78 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC11.01□□□□□ -0.65
LCA10Q71F78 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC11.01□□□□□ -0.65
LCA10Q71F78 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LCA10Q71F78 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LCA10Q71F78 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
LCA10Q71F78 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LCA10Q71F78 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
LCA10Q71F78 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
LCA10Q71F78 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LCA10Q71F78 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC11.01□□□□□ -0.65
LCA10Q71F78 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC11.01□□□□□ -0.65
LCA10Q71F78 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LCA10Q71F78 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC11.01□□□□□ -0.65
LCA10Q71F78 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
LCA10Q71F78 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LCA10Q71F78 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LCA10Q71F78 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LCA10Q71F78 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LCA10Q71F78 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LCA10Q71F78 AC004448.1-201ENST00000458332 883 ntBASIC11.01□□□□□ -0.65
LCA10Q71F78 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC11.01□□□□□ -0.65
LCA10Q71F78 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LCA10Q71F78 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC11.01□□□□□ -0.65
LCA10Q71F78 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LCA10Q71F78 AL513477.1-201ENST00000602865 2407 ntBASIC11.01□□□□□ -0.65
LCA10Q71F78 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LCA10Q71F78 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LCA10Q71F78 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LCA10Q71F78 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
LCA10Q71F78 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LCA10Q71F78 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
LCA10Q71F78 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
LCA10Q71F78 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
LCA10Q71F78 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LCA10Q71F78 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
LCA10Q71F78 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
LCA10Q71F78 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LCA10Q71F78 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LCA10Q71F78 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LCA10Q71F78 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LCA10Q71F78 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC11.01□□□□□ -0.65
LCA10Q71F78 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LCA10Q71F78 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
LCA10Q71F78 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC11.01□□□□□ -0.65
LCA10Q71F78 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
LCA10Q71F78 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LCA10Q71F78 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LCA10Q71F78 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC11□□□□□ -0.65
LCA10Q71F78 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC11□□□□□ -0.65
LCA10Q71F78 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms