Protein–RNA interactions for Protein: Q5VSP4

LCN1P1, Putative lipocalin 1-like protein 1, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P1Q5VSP4 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
LCN1P1Q5VSP4 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LCN1P1Q5VSP4 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
LCN1P1Q5VSP4 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.5■□□□□ 0.55
LCN1P1Q5VSP4 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LCN1P1Q5VSP4 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LCN1P1Q5VSP4 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
LCN1P1Q5VSP4 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.5■□□□□ 0.55
LCN1P1Q5VSP4 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.5■□□□□ 0.55
LCN1P1Q5VSP4 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.5■□□□□ 0.55
LCN1P1Q5VSP4 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
LCN1P1Q5VSP4 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
LCN1P1Q5VSP4 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LCN1P1Q5VSP4 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.5■□□□□ 0.55
LCN1P1Q5VSP4 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LCN1P1Q5VSP4 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
LCN1P1Q5VSP4 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
LCN1P1Q5VSP4 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
LCN1P1Q5VSP4 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
LCN1P1Q5VSP4 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC18.49■□□□□ 0.55
LCN1P1Q5VSP4 TSPY26P-201ENST00000476365 1326 ntBASIC18.49■□□□□ 0.55
LCN1P1Q5VSP4 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
LCN1P1Q5VSP4 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
LCN1P1Q5VSP4 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.49■□□□□ 0.55
LCN1P1Q5VSP4 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LCN1P1Q5VSP4 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
LCN1P1Q5VSP4 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LCN1P1Q5VSP4 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.49■□□□□ 0.55
LCN1P1Q5VSP4 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC18.49■□□□□ 0.55
LCN1P1Q5VSP4 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LCN1P1Q5VSP4 AC027682.1-201ENST00000562846 899 ntBASIC18.49■□□□□ 0.55
LCN1P1Q5VSP4 AC008764.7-201ENST00000593779 1081 ntBASIC18.49■□□□□ 0.55
LCN1P1Q5VSP4 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.49■□□□□ 0.55
LCN1P1Q5VSP4 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.49■□□□□ 0.55
LCN1P1Q5VSP4 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
LCN1P1Q5VSP4 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LCN1P1Q5VSP4 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.49■□□□□ 0.55
LCN1P1Q5VSP4 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LCN1P1Q5VSP4 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LCN1P1Q5VSP4 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
LCN1P1Q5VSP4 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LCN1P1Q5VSP4 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LCN1P1Q5VSP4 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
LCN1P1Q5VSP4 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LCN1P1Q5VSP4 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.49■□□□□ 0.55
LCN1P1Q5VSP4 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LCN1P1Q5VSP4 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
LCN1P1Q5VSP4 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LCN1P1Q5VSP4 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LCN1P1Q5VSP4 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LCN1P1Q5VSP4 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LCN1P1Q5VSP4 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LCN1P1Q5VSP4 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
LCN1P1Q5VSP4 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LCN1P1Q5VSP4 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.48■□□□□ 0.55
LCN1P1Q5VSP4 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18.48■□□□□ 0.55
LCN1P1Q5VSP4 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC18.48■□□□□ 0.55
LCN1P1Q5VSP4 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC18.48■□□□□ 0.55
LCN1P1Q5VSP4 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
LCN1P1Q5VSP4 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.48■□□□□ 0.55
LCN1P1Q5VSP4 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.48■□□□□ 0.55
LCN1P1Q5VSP4 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.48■□□□□ 0.55
LCN1P1Q5VSP4 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LCN1P1Q5VSP4 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LCN1P1Q5VSP4 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
LCN1P1Q5VSP4 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LCN1P1Q5VSP4 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
LCN1P1Q5VSP4 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
LCN1P1Q5VSP4 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
LCN1P1Q5VSP4 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LCN1P1Q5VSP4 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.47■□□□□ 0.55
LCN1P1Q5VSP4 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.47■□□□□ 0.55
LCN1P1Q5VSP4 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.47■□□□□ 0.55
LCN1P1Q5VSP4 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.47■□□□□ 0.55
LCN1P1Q5VSP4 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
LCN1P1Q5VSP4 AC099791.1-201ENST00000416440 715 ntBASIC18.47■□□□□ 0.55
LCN1P1Q5VSP4 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18.47■□□□□ 0.55
LCN1P1Q5VSP4 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LCN1P1Q5VSP4 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.47■□□□□ 0.55
LCN1P1Q5VSP4 FP700111.2-201ENST00000619190 1892 ntBASIC18.47■□□□□ 0.55
LCN1P1Q5VSP4 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
LCN1P1Q5VSP4 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LCN1P1Q5VSP4 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
LCN1P1Q5VSP4 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LCN1P1Q5VSP4 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LCN1P1Q5VSP4 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
LCN1P1Q5VSP4 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LCN1P1Q5VSP4 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
LCN1P1Q5VSP4 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
LCN1P1Q5VSP4 AP004607.4-201ENST00000530158 1459 ntBASIC18.46■□□□□ 0.55
LCN1P1Q5VSP4 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LCN1P1Q5VSP4 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.46■□□□□ 0.55
LCN1P1Q5VSP4 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LCN1P1Q5VSP4 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LCN1P1Q5VSP4 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LCN1P1Q5VSP4 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LCN1P1Q5VSP4 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LCN1P1Q5VSP4 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LCN1P1Q5VSP4 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LCN1P1Q5VSP4 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms