Protein–RNA interactions for Protein: Q5T1V6

DDX59, Probable ATP-dependent RNA helicase DDX59, humanhuman

Known RBP eCLIP

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX59Q5T1V6 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.44■□□□□ 0.541e-7■■□□□ 12.5
DDX59Q5T1V6 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.29■□□□□ 0.521e-7■■□□□ 12.5
DDX59Q5T1V6 MIB2-213ENST00000487053 3252 ntTSL 518.11■□□□□ 0.491e-7■■□□□ 12.5
DDX59Q5T1V6 MIB2-220ENST00000506488 2997 ntTSL 517.18■□□□□ 0.341e-7■■□□□ 12.5
DDX59Q5T1V6 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.321e-7■■□□□ 12.5
DDX59Q5T1V6 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.311e-7■■□□□ 12.5
DDX59Q5T1V6 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.291e-7■■□□□ 12.5
DDX59Q5T1V6 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.281e-7■■□□□ 12.5
DDX59Q5T1V6 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.181e-7■■□□□ 12.5
DDX59Q5T1V6 MIB2-214ENST00000489635 3034 ntTSL 215.61■□□□□ 0.091e-7■■□□□ 12.5
DDX59Q5T1V6 MIB2-230ENST00000514363 592 ntTSL 315.53■□□□□ 0.081e-7■■□□□ 12.5
DDX59Q5T1V6 MIB2-226ENST00000511502 3326 ntTSL 215.45■□□□□ 0.061e-7■■□□□ 12.5
DDX59Q5T1V6 MIB2-210ENST00000479659 4247 ntTSL 215.39■□□□□ 0.051e-7■■□□□ 12.5
DDX59Q5T1V6 MIB2-209ENST00000477990 2821 ntTSL 213.42□□□□□ -0.261e-7■■□□□ 12.5
DDX59Q5T1V6 VSNL1-202ENST00000404666 992 ntAPPRIS P1 TSL 3 BASIC10.45□□□□□ -0.741e-7■■□□□ 12.5
DDX59Q5T1V6 VSNL1-201ENST00000295156 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.831e-7■■□□□ 12.5
DDX59Q5T1V6 VSNL1-204ENST00000451533 562 ntTSL 49□□□□□ -0.971e-7■■□□□ 12.5
DDX59Q5T1V6 VSNL1-205ENST00000457525 576 ntTSL 36.69□□□□□ -1.341e-7■■□□□ 12.5
DDX59Q5T1V6 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.511e-7■■□□□ 12.5
DDX59Q5T1V6 RCOR3-212ENST00000529572 1022 ntTSL 55.92□□□□□ -1.466e-11■■□□□ 12.5
DDX59Q5T1V6 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.98□□□□□ -1.616e-11■■□□□ 12.5
DDX59Q5T1V6 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.475e-9■■□□□ 12.5
DDX59Q5T1V6 SLC16A3-205ENST00000578574 958 ntTSL 221.39■■□□□ 1.015e-9■■□□□ 12.5
DDX59Q5T1V6 SLC16A3-220ENST00000584781 562 ntTSL 420.23■□□□□ 0.835e-9■■□□□ 12.5
DDX59Q5T1V6 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.715e-9■■□□□ 12.5
DDX59Q5T1V6 SLC16A3-208ENST00000579572 863 ntTSL 317.9■□□□□ 0.465e-9■■□□□ 12.5
DDX59Q5T1V6 SLC16A3-206ENST00000578684 866 ntTSL 316.97■□□□□ 0.315e-9■■□□□ 12.5
DDX59Q5T1V6 SLC16A3-217ENST00000583237 808 ntTSL 316.47■□□□□ 0.235e-9■■□□□ 12.5
DDX59Q5T1V6 SLC16A3-212ENST00000581642 557 ntTSL 416.35■□□□□ 0.215e-9■■□□□ 12.5
DDX59Q5T1V6 SLC16A3-219ENST00000584689 1033 ntTSL 216.11■□□□□ 0.175e-9■■□□□ 12.5
DDX59Q5T1V6 SLC16A3-203ENST00000577650 545 ntTSL 314.85□□□□□ -0.035e-9■■□□□ 12.5
DDX59Q5T1V6 SLC16A3-213ENST00000582715 279 ntTSL 513.5□□□□□ -0.255e-9■■□□□ 12.5
DDX59Q5T1V6 TMEM189-205ENST00000453505 2028 ntTSL 1 (best)19.13■□□□□ 0.652e-6■■□□□ 12.5
DDX59Q5T1V6 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.642e-6■■□□□ 12.5
DDX59Q5T1V6 TMEM189-204ENST00000371658 813 ntTSL 318.52■□□□□ 0.562e-6■■□□□ 12.5
DDX59Q5T1V6 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.232e-6■■□□□ 12.5
DDX59Q5T1V6 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.122e-6■■□□□ 12.5
DDX59Q5T1V6 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.111e-6■■□□□ 12.5
DDX59Q5T1V6 PTPRS-206ENST00000588552 5443 ntTSL 1 (best)15.07■□□□□ 01e-6■■□□□ 12.5
DDX59Q5T1V6 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.241e-6■■□□□ 12.5
DDX59Q5T1V6 PTPRS-201ENST00000262963 4766 ntTSL 5 BASIC11.82□□□□□ -0.521e-6■■□□□ 12.5
DDX59Q5T1V6 PTPRS-210ENST00000592099 4766 ntTSL 1 (best) BASIC11.82□□□□□ -0.521e-6■■□□□ 12.5
DDX59Q5T1V6 PTPRS-202ENST00000353284 4518 ntTSL 5 BASIC11.72□□□□□ -0.531e-6■■□□□ 12.5
DDX59Q5T1V6 EHBP1-204ENST00000405482 1311 ntTSL 220.28■□□□□ 0.841e-6■■□□□ 12.4
DDX59Q5T1V6 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.651e-6■■□□□ 12.4
DDX59Q5T1V6 EHBP1-201ENST00000263991 5165 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.881e-6■■□□□ 12.4
DDX59Q5T1V6 EHBP1-211ENST00000449820 539 ntTSL 58.2□□□□□ -1.11e-6■■□□□ 12.4
DDX59Q5T1V6 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC7.22□□□□□ -1.251e-6■■□□□ 12.4
DDX59Q5T1V6 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.591e-6■■□□□ 12.4
DDX59Q5T1V6 PLCB1-224ENST00000636319 2930 ntTSL 518.17■□□□□ 0.51e-6■■□□□ 12.4
DDX59Q5T1V6 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.63■□□□□ 0.251e-6■■□□□ 12.4
DDX59Q5T1V6 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.181e-6■■□□□ 12.4
DDX59Q5T1V6 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.16■□□□□ 0.181e-6■■□□□ 12.4
DDX59Q5T1V6 PLCB1-214ENST00000626161 706 ntTSL 515.2■□□□□ 0.021e-6■■□□□ 12.4
DDX59Q5T1V6 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.83□□□□□ -0.21e-6■■□□□ 12.4
DDX59Q5T1V6 PLCB1-213ENST00000626114 598 ntTSL 59.29□□□□□ -0.921e-6■■□□□ 12.4
DDX59Q5T1V6 PLCB1-221ENST00000635830 3237 ntTSL 57.44□□□□□ -1.221e-6■■□□□ 12.4
DDX59Q5T1V6 PLCB1-219ENST00000630495 759 ntTSL 57.44□□□□□ -1.221e-6■■□□□ 12.4
DDX59Q5T1V6 PLCB1-227ENST00000636825 3020 ntTSL 57.33□□□□□ -1.241e-6■■□□□ 12.4
DDX59Q5T1V6 PLCB1-212ENST00000625874 3206 ntTSL 27.24□□□□□ -1.251e-6■■□□□ 12.4
DDX59Q5T1V6 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC6.77□□□□□ -1.321e-6■■□□□ 12.4
DDX59Q5T1V6 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.36□□□□□ -1.711e-6■■□□□ 12.4
DDX59Q5T1V6 PLCB1-226ENST00000636784 100 ntTSL 53.32□□□□□ -1.881e-6■■□□□ 12.4
DDX59Q5T1V6 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.591e-6■■□□□ 12.4
DDX59Q5T1V6 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.352e-6■■□□□ 12.4
DDX59Q5T1V6 ASPSCR1-216ENST00000583503 641 ntTSL 315.96■□□□□ 0.152e-8■■□□□ 12.4
DDX59Q5T1V6 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.461e-6■■□□□ 12.4
DDX59Q5T1V6 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC25.12■■□□□ 1.615e-8■■□□□ 12.4
DDX59Q5T1V6 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.425e-8■■□□□ 12.4
DDX59Q5T1V6 TCEA2-201ENST00000339217 953 ntTSL 323.6■■□□□ 1.375e-8■■□□□ 12.4
DDX59Q5T1V6 TCEA2-216ENST00000487164 1060 ntTSL 1 (best)21.39■■□□□ 1.015e-8■■□□□ 12.4
DDX59Q5T1V6 TCEA2-214ENST00000476113 421 ntTSL 211.13□□□□□ -0.635e-8■■□□□ 12.4
DDX59Q5T1V6 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.79■□□□□ 0.922e-6■■□□□ 12.3
DDX59Q5T1V6 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC24.76■■□□□ 1.554e-8■■□□□ 12.3
DDX59Q5T1V6 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.124e-8■■□□□ 12.3
DDX59Q5T1V6 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.25■□□□□ 0.671e-8■■□□□ 12.3
DDX59Q5T1V6 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.621e-8■■□□□ 12.3
DDX59Q5T1V6 LRCH4-204ENST00000476881 1675 ntTSL 218.7■□□□□ 0.581e-8■■□□□ 12.3
DDX59Q5T1V6 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.95■□□□□ 0.141e-8■■□□□ 12.3
DDX59Q5T1V6 LRCH4-205ENST00000485554 774 ntTSL 315.81■□□□□ 0.121e-8■■□□□ 12.3
DDX59Q5T1V6 LRCH4-202ENST00000467201 4754 ntTSL 215.42■□□□□ 0.061e-8■■□□□ 12.3
DDX59Q5T1V6 PCBP2-206ENST00000455667 2741 ntAPPRIS ALT1 TSL 1 (best) BASIC9.91□□□□□ -0.824e-16■■□□□ 12.3
DDX59Q5T1V6 SHROOM1-204ENST00000440118 1080 ntTSL 217.81■□□□□ 0.442e-9■■□□□ 12.2
DDX59Q5T1V6 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.232e-9■■□□□ 12.2
DDX59Q5T1V6 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC12.18□□□□□ -0.462e-9■■□□□ 12.2
DDX59Q5T1V6 Z84485.1-201ENST00000526611 587 ntTSL 310.92□□□□□ -0.662e-9■■□□□ 12.2
DDX59Q5T1V6 SLC6A8-209ENST00000476466 470 ntTSL 312.74□□□□□ -0.372e-7■■□□□ 12.2
DDX59Q5T1V6 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.172e-6■■□□□ 12.2
DDX59Q5T1V6 PCIF1-202ENST00000479348 1324 ntTSL 1 (best)12.79□□□□□ -0.362e-6■■□□□ 12.2
DDX59Q5T1V6 SAMD4B-213ENST00000610417 3664 ntAPPRIS P3 TSL 2 BASIC10.43□□□□□ -0.742e-6■■□□□ 12.2
DDX59Q5T1V6 SAMD4B-214ENST00000611159 3662 ntTSL 5 BASIC9.91□□□□□ -0.822e-6■■□□□ 12.2
DDX59Q5T1V6 AMBRA1-205ENST00000526606 522 ntTSL 417.05■□□□□ 0.321e-8■■□□□ 12.2
DDX59Q5T1V6 AMBRA1-212ENST00000534300 5067 ntTSL 1 (best) BASIC11.93□□□□□ -0.51e-8■■□□□ 12.2
DDX59Q5T1V6 AMBRA1-210ENST00000531542 561 ntTSL 311.88□□□□□ -0.511e-8■■□□□ 12.2
DDX59Q5T1V6 AMBRA1-201ENST00000314845 5023 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.541e-8■■□□□ 12.2
DDX59Q5T1V6 AMBRA1-211ENST00000533727 4817 ntTSL 1 (best) BASIC10.74□□□□□ -0.691e-8■■□□□ 12.2
DDX59Q5T1V6 AMBRA1-202ENST00000458649 5351 ntTSL 2 BASIC10.32□□□□□ -0.761e-8■■□□□ 12.2
DDX59Q5T1V6 AMBRA1-206ENST00000528950 4102 ntTSL 5 BASIC8.68□□□□□ -1.021e-8■■□□□ 12.2
DDX59Q5T1V6 STXBP2-210ENST00000595950 552 ntTSL 520.32■□□□□ 0.841e-6■■□□□ 12.2
DDX59Q5T1V6 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.45■□□□□ 0.381e-6■■□□□ 12.2
Retrieved 100 of 7,289 protein–RNA pairs in 44.6 ms