Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CXCR4P61073 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CXCR4P61073 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
CXCR4P61073 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CXCR4P61073 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC18.67■□□□□ 0.58
CXCR4P61073 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CXCR4P61073 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CXCR4P61073 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CXCR4P61073 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.67■□□□□ 0.58
CXCR4P61073 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CXCR4P61073 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CXCR4P61073 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.67■□□□□ 0.58
CXCR4P61073 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CXCR4P61073 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CXCR4P61073 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CXCR4P61073 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CXCR4P61073 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CXCR4P61073 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CXCR4P61073 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
CXCR4P61073 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CXCR4P61073 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CXCR4P61073 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CXCR4P61073 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CXCR4P61073 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CXCR4P61073 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CXCR4P61073 BX005040.4-201ENST00000637145 1518 ntBASIC18.66■□□□□ 0.58
CXCR4P61073 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CXCR4P61073 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CXCR4P61073 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CXCR4P61073 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CXCR4P61073 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC18.66■□□□□ 0.58
CXCR4P61073 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.66■□□□□ 0.58
CXCR4P61073 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.66■□□□□ 0.58
CXCR4P61073 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.66■□□□□ 0.58
CXCR4P61073 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC18.66■□□□□ 0.58
CXCR4P61073 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CXCR4P61073 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CXCR4P61073 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CXCR4P61073 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.66■□□□□ 0.58
CXCR4P61073 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.66■□□□□ 0.58
CXCR4P61073 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.66■□□□□ 0.58
CXCR4P61073 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CXCR4P61073 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CXCR4P61073 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.66■□□□□ 0.58
CXCR4P61073 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CXCR4P61073 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CXCR4P61073 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.65■□□□□ 0.58
CXCR4P61073 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CXCR4P61073 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CXCR4P61073 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CXCR4P61073 AL158211.5-201ENST00000623583 2518 ntBASIC18.65■□□□□ 0.58
CXCR4P61073 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CXCR4P61073 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CXCR4P61073 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CXCR4P61073 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CXCR4P61073 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CXCR4P61073 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CXCR4P61073 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CXCR4P61073 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC18.65■□□□□ 0.58
CXCR4P61073 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.65■□□□□ 0.58
CXCR4P61073 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CXCR4P61073 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.65■□□□□ 0.58
CXCR4P61073 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CXCR4P61073 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CXCR4P61073 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CXCR4P61073 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.65■□□□□ 0.58
CXCR4P61073 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CXCR4P61073 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CXCR4P61073 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CXCR4P61073 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
CXCR4P61073 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CXCR4P61073 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.64■□□□□ 0.57
CXCR4P61073 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CXCR4P61073 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CXCR4P61073 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CXCR4P61073 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.64■□□□□ 0.57
CXCR4P61073 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CXCR4P61073 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC18.64■□□□□ 0.57
CXCR4P61073 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC18.64■□□□□ 0.57
CXCR4P61073 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.64■□□□□ 0.57
CXCR4P61073 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CXCR4P61073 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CXCR4P61073 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.64■□□□□ 0.57
CXCR4P61073 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CXCR4P61073 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CXCR4P61073 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CXCR4P61073 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.64■□□□□ 0.57
CXCR4P61073 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.64■□□□□ 0.57
CXCR4P61073 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.64■□□□□ 0.57
CXCR4P61073 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CXCR4P61073 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CXCR4P61073 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.63■□□□□ 0.57
CXCR4P61073 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CXCR4P61073 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.63■□□□□ 0.57
CXCR4P61073 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC18.63■□□□□ 0.57
CXCR4P61073 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.63■□□□□ 0.57
CXCR4P61073 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.63■□□□□ 0.57
CXCR4P61073 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.63■□□□□ 0.57
CXCR4P61073 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CXCR4P61073 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms