Protein–RNA interactions for Protein: P26368

U2AF2, Splicing factor U2AF 65 kDa subunit, humanhuman

Known RBP eCLIP

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2P26368 SH3TC1-205ENST00000502559 3798 ntTSL 216■□□□□ 0.159e-16■■■■□ 25.6
U2AF2P26368 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.139e-16■■■■□ 25.6
U2AF2P26368 DMKN-259ENST00000498211 666 ntTSL 1 (best)15.59■□□□□ 0.091e-6■■■■□ 25.6
U2AF2P26368 DMKN-247ENST00000483855 606 ntTSL 1 (best)15.54■□□□□ 0.081e-6■■■■□ 25.6
U2AF2P26368 DMKN-224ENST00000464709 822 ntTSL 1 (best)15.54■□□□□ 0.081e-6■■■■□ 25.6
U2AF2P26368 DMKN-258ENST00000493979 648 ntTSL 1 (best)15.54■□□□□ 0.081e-6■■■■□ 25.6
U2AF2P26368 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.071e-6■■■■□ 25.6
U2AF2P26368 DMKN-223ENST00000463292 642 ntTSL 1 (best)9.81□□□□□ -0.841e-6■■■■□ 25.6
U2AF2P26368 DMKN-268ENST00000602781 827 ntAPPRIS ALT2 TSL 3 BASIC9.56□□□□□ -0.881e-6■■■■□ 25.6
U2AF2P26368 PRH1-203ENST00000538332 675 ntAPPRIS ALT2 TSL 54.78□□□□□ -1.649e-7■■■■□ 25.6
U2AF2P26368 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC2.95□□□□□ -1.949e-7■■■■□ 25.6
U2AF2P26368 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC28.87■■■□□ 2.211e-8■■■■□ 25.6
U2AF2P26368 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC26.79■■□□□ 1.881e-8■■■■□ 25.6
U2AF2P26368 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.351e-8■■■■□ 25.6
U2AF2P26368 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.261e-8■■■■□ 25.6
U2AF2P26368 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC8.35□□□□□ -1.072e-6■■■■□ 25.6
U2AF2P26368 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.212e-6■■■■□ 25.6
U2AF2P26368 CYP3A5-206ENST00000463364 1625 ntTSL 1 (best)6.4□□□□□ -1.382e-6■■■■□ 25.6
U2AF2P26368 CYP3A5-213ENST00000481825 2857 ntTSL 1 (best)5.83□□□□□ -1.482e-6■■■■□ 25.6
U2AF2P26368 CYP3A5-208ENST00000466061 1564 ntTSL 1 (best)5.67□□□□□ -1.52e-6■■■■□ 25.6
U2AF2P26368 CYP3A5-210ENST00000469887 3149 ntTSL 55.06□□□□□ -1.62e-6■■■■□ 25.6
U2AF2P26368 CYP3A5-205ENST00000461920 2208 ntTSL 24.58□□□□□ -1.682e-6■■■■□ 25.6
U2AF2P26368 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.882e-8■■■■□ 25.6
U2AF2P26368 TADA1-202ENST00000467021 2539 ntTSL 27.79□□□□□ -1.162e-8■■■■□ 25.6
U2AF2P26368 SFT2D1-202ENST00000478705 659 ntTSL 218.17■□□□□ 0.51e-9■■■■□ 25.5
U2AF2P26368 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.361e-9■■■■□ 25.5
U2AF2P26368 SFT2D1-204ENST00000487841 2576 ntTSL 1 (best)14.8□□□□□ -0.041e-9■■■■□ 25.5
U2AF2P26368 SFT2D1-203ENST00000479490 2061 ntTSL 1 (best)13.28□□□□□ -0.281e-16■■■■□ 25.5
U2AF2P26368 SCAF8-204ENST00000461219 677 ntTSL 522.94■■□□□ 1.261e-7■■■■□ 25.5
U2AF2P26368 SCAF8-205ENST00000464628 468 ntTSL 512.55□□□□□ -0.41e-7■■■■□ 25.5
U2AF2P26368 FMO5-209ENST00000619062 1842 ntTSL 214.01□□□□□ -0.172e-7■■■■□ 25.5
U2AF2P26368 C2CD5-211ENST00000541310 2449 ntTSL 216.64■□□□□ 0.251e-6■■■■□ 25.5
U2AF2P26368 C2CD5-213ENST00000542683 791 ntTSL 513.43□□□□□ -0.261e-6■■■■□ 25.5
U2AF2P26368 ARL6IP6-205ENST00000495469 1308 ntTSL 223.35■■□□□ 1.332e-9■■■■□ 25.5
U2AF2P26368 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.772e-9■■■■□ 25.5
U2AF2P26368 ARL6IP6-202ENST00000425034 465 ntTSL 22.29□□□□□ -2.042e-9■■■■□ 25.5
U2AF2P26368 ARL6IP6-204ENST00000463690 1402 ntTSL 22.15□□□□□ -2.072e-9■■■■□ 25.5
U2AF2P26368 ARL6IP6-203ENST00000455875 479 ntTSL 21.86□□□□□ -2.112e-9■■■■□ 25.5
U2AF2P26368 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.74e-7■■■■□ 25.5
U2AF2P26368 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.414e-7■■■■□ 25.5
U2AF2P26368 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC16.1■□□□□ 0.173e-12■■■■□ 25.5
U2AF2P26368 EWSR1-217ENST00000483415 3231 ntTSL 1 (best)12.79□□□□□ -0.363e-12■■■■□ 25.5
U2AF2P26368 EWSR1-211ENST00000437155 933 ntTSL 510.58□□□□□ -0.725e-12■■■■□ 25.5
U2AF2P26368 EWSR1-214ENST00000455726 710 ntTSL 38.04□□□□□ -1.125e-12■■■■□ 25.5
U2AF2P26368 EWSR1-209ENST00000415761 587 ntTSL 33.58□□□□□ -1.845e-12■■■■□ 25.5
U2AF2P26368 TXNRD1-220ENST00000529751 557 ntTSL 419.12■□□□□ 0.651e-15■■■■□ 25.5
U2AF2P26368 TPR-203ENST00000467810 581 ntTSL 26.31□□□□□ -1.41e-12■■■■□ 25.5
U2AF2P26368 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC29.98■■■□□ 2.391e-6■■■■□ 25.5
U2AF2P26368 SPATA5L1-207ENST00000559860 2023 ntTSL 227.05■■□□□ 1.921e-6■■■■□ 25.5
U2AF2P26368 SPATA5L1-204ENST00000531970 2464 ntTSL 224.02■■□□□ 1.441e-6■■■■□ 25.5
U2AF2P26368 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.41e-6■■■■□ 25.5
U2AF2P26368 UIMC1-210ENST00000510376 466 ntTSL 25.82□□□□□ -1.482e-10■■■■□ 25.5
U2AF2P26368 KPNA5-201ENST00000356348 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.482e-6■■■■□ 25.5
U2AF2P26368 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.012e-6■■■■□ 25.5
U2AF2P26368 UTP4-203ENST00000562237 2186 ntTSL 1 (best)22.88■■□□□ 1.252e-6■■■■□ 25.4
U2AF2P26368 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.252e-6■■■■□ 25.4
U2AF2P26368 UTP4-202ENST00000352319 1841 ntTSL 5 BASIC11.49□□□□□ -0.572e-6■■■■□ 25.4
U2AF2P26368 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC7.98□□□□□ -1.132e-6■■■■□ 25.4
U2AF2P26368 RAD54L-207ENST00000473251 834 ntTSL 39□□□□□ -0.974e-13■■■■□ 25.4
U2AF2P26368 RAD54L-208ENST00000476687 574 ntTSL 27.97□□□□□ -1.134e-13■■■■□ 25.4
U2AF2P26368 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.91□□□□□ -1.947e-8■■■■□ 25.4
U2AF2P26368 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -27e-8■■■■□ 25.4
U2AF2P26368 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.537e-22■■■■□ 25.4
U2AF2P26368 GARS-208ENST00000485784 761 ntTSL 210.02□□□□□ -0.817e-22■■■■□ 25.4
U2AF2P26368 GARS-209ENST00000496643 772 ntTSL 25.95□□□□□ -1.467e-22■■■■□ 25.4
U2AF2P26368 GARS-204ENST00000465748 447 ntTSL 22.4□□□□□ -2.037e-22■■■■□ 25.4
U2AF2P26368 GARS-202ENST00000444666 619 ntTSL 32.39□□□□□ -2.037e-22■■■■□ 25.4
U2AF2P26368 DOCK1-206ENST00000623213 5761 ntTSL 1 (best) BASIC10.31□□□□□ -0.764e-13■■■■□ 25.4
U2AF2P26368 DOCK1-201ENST00000280333 6797 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.964e-13■■■■□ 25.4
U2AF2P26368 NUP98-206ENST00000397013 939 ntTSL 58.74□□□□□ -1.014e-10■■■■□ 25.4
U2AF2P26368 NUP98-216ENST00000529379 536 ntTSL 35.36□□□□□ -1.554e-10■■■■□ 25.4
U2AF2P26368 SERBP1-207ENST00000490406 624 ntTSL 513.55□□□□□ -0.245e-10■■■■□ 25.4
U2AF2P26368 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.621e-7■■■■□ 25.4
U2AF2P26368 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC26.95■■□□□ 1.97e-9■■■■□ 25.4
U2AF2P26368 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC19.41■□□□□ 0.77e-9■■■■□ 25.4
U2AF2P26368 ZNF767P-204ENST00000486492 1616 ntTSL 219.4■□□□□ 0.77e-9■■■■□ 25.4
U2AF2P26368 DNM2-221ENST00000593203 2507 ntTSL 217.6■□□□□ 0.417e-9■■■■□ 25.4
U2AF2P26368 DNM2-219ENST00000591818 538 ntTSL 416.12■□□□□ 0.177e-9■■■■□ 25.4
U2AF2P26368 HERC2P9-203ENST00000528584 2947 ntTSL 1 (best) BASIC14.63□□□□□ -0.077e-9■■■■□ 25.4
U2AF2P26368 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC15.75■□□□□ 0.115e-31■■■■□ 25.4
U2AF2P26368 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.445e-31■■■■□ 25.4
U2AF2P26368 ARGLU1-201ENST00000360629 361 ntTSL 23.28□□□□□ -1.885e-31■■■■□ 25.4
U2AF2P26368 HMGCR-201ENST00000287936 4585 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.583e-8■■■■□ 25.4
U2AF2P26368 HMGCR-202ENST00000343975 3681 ntTSL 1 (best) BASIC9.19□□□□□ -0.943e-8■■■■□ 25.4
U2AF2P26368 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.033e-8■■■■□ 25.4
U2AF2P26368 PSMD9-204ENST00000537407 1195 ntTSL 1 (best)21.29■■□□□ 12e-12■■■■□ 25.4
U2AF2P26368 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC21.29■■□□□ 12e-12■■■■□ 25.4
U2AF2P26368 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC18.58■□□□□ 0.562e-12■■■■□ 25.4
U2AF2P26368 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.512e-12■■■■□ 25.4
U2AF2P26368 PSMD9-209ENST00000543699 1001 ntTSL 517.86■□□□□ 0.452e-12■■■■□ 25.4
U2AF2P26368 PSMD9-206ENST00000540962 793 ntTSL 217.8■□□□□ 0.442e-12■■■■□ 25.4
U2AF2P26368 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.32e-12■■■■□ 25.4
U2AF2P26368 PSMD9-203ENST00000535293 1773 ntTSL 315.2■□□□□ 0.022e-12■■■■□ 25.4
U2AF2P26368 PSMD9-210ENST00000544254 1481 ntTSL 214.96□□□□□ -0.012e-12■■■■□ 25.4
U2AF2P26368 PSMD9-211ENST00000544724 3051 ntTSL 211.4□□□□□ -0.582e-12■■■■□ 25.4
U2AF2P26368 IPO11-210ENST00000507640 458 ntTSL 31.81□□□□□ -2.127e-7■■■■□ 25.4
U2AF2P26368 FUS-209ENST00000566605 1787 ntTSL 1 (best)30■■■□□ 2.393e-10■■■■□ 25.4
U2AF2P26368 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC28.41■■■□□ 2.143e-10■■■■□ 25.4
U2AF2P26368 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC25.51■■□□□ 1.673e-10■■■■□ 25.4
U2AF2P26368 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.393e-10■■■■□ 25.4
Retrieved 100 of 36,523 protein–RNA pairs in 421.2 ms