RNA–Protein interactions for RNA: ENST00000541310.5

C2CD5-211, Transcript of C2 calcium dependent domain containing 5, humanhuman

TSL 2

Gene C2CD5, Length 2,449 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD5-211ENST00000541310 NISCHQ9Y2I1 1504 aa28.13■■■□□ 2.09
C2CD5-211ENST00000541310 CCDC180Q9P1Z9 1646 aa24.25■■□□□ 1.47
C2CD5-211ENST00000541310 DCAF8L2P0C7V8 631 aa23.74■■□□□ 1.39
C2CD5-211ENST00000541310 PELP1Q8IZL8 1130 aaKnown RBP23.71■■□□□ 1.39
C2CD5-211ENST00000541310 ZCCHC6Q5VYS8 1495 aaKnown RBP23.61■■□□□ 1.37
C2CD5-211ENST00000541310 SHROOM4Q9ULL8 1493 aa23.54■■□□□ 1.36
C2CD5-211ENST00000541310 ABCC9O60706 1549 aa23.34■■□□□ 1.33
C2CD5-211ENST00000541310 MYT1Q01538 1121 aa23.12■■□□□ 1.29
C2CD5-211ENST00000541310 DCAF1Q9Y4B6 1507 aa22.99■■□□□ 1.27
C2CD5-211ENST00000541310 HRCP23327 699 aa22.95■■□□□ 1.26
C2CD5-211ENST00000541310 SCRIBQ14160 1630 aa22.71■■□□□ 1.23
C2CD5-211ENST00000541310 SUPT5HO00267 1087 aaKnown RBP22.67■■□□□ 1.22
C2CD5-211ENST00000541310 NACADO15069 1562 aa22.63■■□□□ 1.21
C2CD5-211ENST00000541310 MYO15BQ96JP2 1530 aa22.62■■□□□ 1.21
C2CD5-211ENST00000541310 RB1CC1Q8TDY2 1594 aa22.47■■□□□ 1.19
C2CD5-211ENST00000541310 PPARGC1BQ86YN6 1023 aaKnown RBP22.33■■□□□ 1.17
C2CD5-211ENST00000541310 SCAF1Q9H7N4 1312 aaKnown RBP22.25■■□□□ 1.15
C2CD5-211ENST00000541310 PABPN1Q86U42 306 aaKnown RBP eCLIP22.19■■□□□ 1.14
C2CD5-211ENST00000541310 UNC13AQ9UPW8 1703 aa22.17■■□□□ 1.14
C2CD5-211ENST00000541310 CECR2Q9BXF3 1484 aa22.08■■□□□ 1.12
C2CD5-211ENST00000541310 TTBK1Q5TCY1 1321 aaPredicted RBP22.05■■□□□ 1.12
C2CD5-211ENST00000541310 RSF1Q96T23 1441 aaPredicted RBP21.96■■□□□ 1.11
C2CD5-211ENST00000541310 BICRAQ9NZM4 1560 aa21.92■■□□□ 1.1
C2CD5-211ENST00000541310 MROH2BQ7Z745 1585 aa21.88■■□□□ 1.09
C2CD5-211ENST00000541310 PCGF6Q9BYE7 350 aa21.87■■□□□ 1.09
C2CD5-211ENST00000541310 WIZO95785 1651 aa21.73■■□□□ 1.07
C2CD5-211ENST00000541310 BAZ1AQ9NRL2 1556 aaPredicted RBP21.65■■□□□ 1.06
C2CD5-211ENST00000541310 SMARCA4P51532 1647 aa21.6■■□□□ 1.05
C2CD5-211ENST00000541310 CHIC1Q5VXU3 224 aa21.56■■□□□ 1.04
C2CD5-211ENST00000541310 BCL11AQ9H165 835 aa21.43■■□□□ 1.02
C2CD5-211ENST00000541310 PRKCSHP14314 528 aaPredicted RBP21.4■■□□□ 1.02
C2CD5-211ENST00000541310 ACIN1Q9UKV3 1341 aaKnown RBP21.4■■□□□ 1.02
C2CD5-211ENST00000541310 TOP2AP11388 1531 aaKnown RBP21.3■■□□□ 1
C2CD5-211ENST00000541310 NEUROD1Q13562 356 aa21.26■□□□□ 0.99
C2CD5-211ENST00000541310 ATAD2BQ9ULI0 1458 aa21.26■□□□□ 0.99
C2CD5-211ENST00000541310 EIF4G1Q04637 1599 aaKnown RBP21.25■□□□□ 0.99
C2CD5-211ENST00000541310 CCDC88BA6NC98 1476 aa21.24■□□□□ 0.99
C2CD5-211ENST00000541310 GTF3C3Q9Y5Q9 886 aa21.23■□□□□ 0.99
C2CD5-211ENST00000541310 FAM9AQ8IZU1 332 aaPredicted RBP21.23■□□□□ 0.99
C2CD5-211ENST00000541310 SMARCA2P51531 1590 aa21.19■□□□□ 0.98
C2CD5-211ENST00000541310 ZEB1P37275 1124 aaPredicted RBP21.18■□□□□ 0.98
C2CD5-211ENST00000541310 CENPBP07199 599 aaPredicted RBP21.17■□□□□ 0.98
C2CD5-211ENST00000541310 PEG3Q9GZU2 1588 aa21.17■□□□□ 0.98
C2CD5-211ENST00000541310 BAZ1BQ9UIG0 1483 aaKnown RBP21.16■□□□□ 0.98
C2CD5-211ENST00000541310 TRIM41Q8WV44 630 aa21.11■□□□□ 0.97
C2CD5-211ENST00000541310 LOC105371045A0A1W2PR82 267 aa20.98■□□□□ 0.95
C2CD5-211ENST00000541310 TRIM26Q12899 539 aaPredicted RBP20.97■□□□□ 0.95
C2CD5-211ENST00000541310 ABCC8Q09428 1581 aa20.97■□□□□ 0.95
C2CD5-211ENST00000541310 NCAPD3P42695 1498 aa20.96■□□□□ 0.95
C2CD5-211ENST00000541310 CC2D2AQ9P2K1 1620 aa20.96■□□□□ 0.95
C2CD5-211ENST00000541310 EHMT2Q96KQ7 1210 aa20.94■□□□□ 0.94
C2CD5-211ENST00000541310 ERICH6Q7L0X2 663 aa20.9■□□□□ 0.94
C2CD5-211ENST00000541310 HMGXB3Q12766 1538 aa20.86■□□□□ 0.93
C2CD5-211ENST00000541310 DNAJC5BQ9UF47 199 aa20.83■□□□□ 0.93
C2CD5-211ENST00000541310 APLP2Q06481 763 aa20.8■□□□□ 0.92
C2CD5-211ENST00000541310 ANP32EQ9BTT0 268 aa20.76■□□□□ 0.91
C2CD5-211ENST00000541310 WRNQ14191 1432 aaPredicted RBP eCLIP20.65■□□□□ 0.9
C2CD5-211ENST00000541310 SYNJ1O43426 1573 aa20.6■□□□□ 0.89
C2CD5-211ENST00000541310 SOGA1O94964 1423 aa20.6■□□□□ 0.89
C2CD5-211ENST00000541310 CFTRP13569 1480 aa20.57■□□□□ 0.88
C2CD5-211ENST00000541310 RUSC2Q8N2Y8 1516 aa20.57■□□□□ 0.88
C2CD5-211ENST00000541310 NESP48681 1621 aa20.54■□□□□ 0.88
C2CD5-211ENST00000541310 CSRNP3Q8WYN3 585 aa20.54■□□□□ 0.88
C2CD5-211ENST00000541310 CADPSQ9ULU8 1353 aa20.53■□□□□ 0.88
C2CD5-211ENST00000541310 DIEXFQ68CQ4 756 aaKnown RBP20.44■□□□□ 0.86
C2CD5-211ENST00000541310 CUX1P39880 1505 aa20.41■□□□□ 0.86
C2CD5-211ENST00000541310 TOP2BQ02880 1626 aa20.37■□□□□ 0.85
C2CD5-211ENST00000541310 FANCD2Q9BXW9 1451 aa20.34■□□□□ 0.85
C2CD5-211ENST00000541310 PRDM2Q13029 1718 aa20.32■□□□□ 0.84
C2CD5-211ENST00000541310 BIVM-ERCC5R4GMW8 1640 aa20.3■□□□□ 0.84
C2CD5-211ENST00000541310 UBTFP17480 764 aaKnown RBP20.26■□□□□ 0.83
C2CD5-211ENST00000541310 RANGAP1P46060 587 aaPredicted RBP20.21■□□□□ 0.83
C2CD5-211ENST00000541310 TSHZ2Q9NRE2 1034 aa20.21■□□□□ 0.83
C2CD5-211ENST00000541310 LAMC3Q9Y6N6 1575 aa20.19■□□□□ 0.82
C2CD5-211ENST00000541310 FGD5Q6ZNL6 1462 aa20.18■□□□□ 0.82
C2CD5-211ENST00000541310 EEA1Q15075 1411 aa20.18■□□□□ 0.82
C2CD5-211ENST00000541310 CEP164Q9UPV0 1460 aa20.16■□□□□ 0.82
C2CD5-211ENST00000541310 YTHDC1Q96MU7 727 aaKnown RBP20.14■□□□□ 0.82
C2CD5-211ENST00000541310 KIF21AQ7Z4S6 1674 aa20.14■□□□□ 0.81
C2CD5-211ENST00000541310 RAD54L2Q9Y4B4 1467 aa20.13■□□□□ 0.81
C2CD5-211ENST00000541310 URB2Q14146 1524 aaKnown RBP20.11■□□□□ 0.81
C2CD5-211ENST00000541310 TOPBP1Q92547 1522 aa20.11■□□□□ 0.81
C2CD5-211ENST00000541310 RAPGEF2Q9Y4G8 1499 aa20.11■□□□□ 0.81
C2CD5-211ENST00000541310 PDS5BQ9NTI5 1447 aa20.11■□□□□ 0.81
C2CD5-211ENST00000541310 CUX2O14529 1486 aa20.1■□□□□ 0.81
C2CD5-211ENST00000541310 GOLGA3Q08378 1498 aa20.07■□□□□ 0.8
C2CD5-211ENST00000541310 KIF27Q86VH2 1401 aa20.06■□□□□ 0.8
C2CD5-211ENST00000541310 DNMBPQ6XZF7 1577 aa20.06■□□□□ 0.8
C2CD5-211ENST00000541310 POLA1P09884 1462 aaPredicted RBP20.06■□□□□ 0.8
C2CD5-211ENST00000541310 CEP162Q5TB80 1403 aa20.05■□□□□ 0.8
C2CD5-211ENST00000541310 TNIKQ9UKE5 1360 aa20.03■□□□□ 0.8
C2CD5-211ENST00000541310 SUPT16HQ9Y5B9 1047 aaKnown RBP20■□□□□ 0.79
C2CD5-211ENST00000541310 CLSPNQ9HAW4 1339 aa20■□□□□ 0.79
C2CD5-211ENST00000541310 KIF21BO75037 1637 aa19.99■□□□□ 0.79
C2CD5-211ENST00000541310 IGF1RP08069 1367 aa19.96■□□□□ 0.79
C2CD5-211ENST00000541310 TDRD9Q8NDG6 1382 aaKnown RBP19.96■□□□□ 0.79
C2CD5-211ENST00000541310 ANO8Q9HCE9 1232 aaPredicted RBP19.95■□□□□ 0.78
C2CD5-211ENST00000541310 PRXQ9BXM0 1461 aa19.94■□□□□ 0.78
C2CD5-211ENST00000541310 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.91■□□□□ 0.78
C2CD5-211ENST00000541310 CCER1Q8TC90 406 aaPredicted RBP19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms