RNA–Protein interactions for RNA: ENST00000544724.5

PSMD9-211, Transcript of proteasome 26S subunit, non-ATPase 9, humanhuman

TSL 2

Gene PSMD9, Length 3,051 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD9-211ENST00000544724 NISCHQ9Y2I1 1504 aa18.05■□□□□ 0.48
PSMD9-211ENST00000544724 SHROOM4Q9ULL8 1493 aa16.47■□□□□ 0.23
PSMD9-211ENST00000544724 SUPT5HO00267 1087 aaKnown RBP16.31■□□□□ 0.2
PSMD9-211ENST00000544724 PPARGC1BQ86YN6 1023 aaKnown RBP15.92■□□□□ 0.14
PSMD9-211ENST00000544724 PCGF6Q9BYE7 350 aa15.91■□□□□ 0.14
PSMD9-211ENST00000544724 HRCP23327 699 aa15.86■□□□□ 0.13
PSMD9-211ENST00000544724 MYO15BQ96JP2 1530 aa15.79■□□□□ 0.12
PSMD9-211ENST00000544724 DCAF8L2P0C7V8 631 aa15.76■□□□□ 0.11
PSMD9-211ENST00000544724 CHIC1Q5VXU3 224 aa15.71■□□□□ 0.11
PSMD9-211ENST00000544724 LOC105371045A0A1W2PR82 267 aa15.59■□□□□ 0.09
PSMD9-211ENST00000544724 EHMT2Q96KQ7 1210 aa15.36■□□□□ 0.05
PSMD9-211ENST00000544724 ZCCHC6Q5VYS8 1495 aaKnown RBP15.27■□□□□ 0.04
PSMD9-211ENST00000544724 FAM9AQ8IZU1 332 aaPredicted RBP15.19■□□□□ 0.02
PSMD9-211ENST00000544724 TRIM26Q12899 539 aaPredicted RBP15.15■□□□□ 0.02
PSMD9-211ENST00000544724 DCAF1Q9Y4B6 1507 aa15.06■□□□□ 0
PSMD9-211ENST00000544724 SCAF1Q9H7N4 1312 aaKnown RBP15.05■□□□□ -0
PSMD9-211ENST00000544724 TRIM41Q8WV44 630 aa14.91□□□□□ -0.02
PSMD9-211ENST00000544724 TTBK1Q5TCY1 1321 aaPredicted RBP14.89□□□□□ -0.03
PSMD9-211ENST00000544724 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.83□□□□□ -0.04
PSMD9-211ENST00000544724 CCDC180Q9P1Z9 1646 aa14.81□□□□□ -0.04
PSMD9-211ENST00000544724 ZEB1P37275 1124 aaPredicted RBP14.78□□□□□ -0.04
PSMD9-211ENST00000544724 NEUROD1Q13562 356 aa14.73□□□□□ -0.05
PSMD9-211ENST00000544724 PELP1Q8IZL8 1130 aaKnown RBP14.71□□□□□ -0.06
PSMD9-211ENST00000544724 CCER1Q8TC90 406 aaPredicted RBP14.69□□□□□ -0.06
PSMD9-211ENST00000544724 GTF3C3Q9Y5Q9 886 aa14.63□□□□□ -0.07
PSMD9-211ENST00000544724 ACIN1Q9UKV3 1341 aaKnown RBP14.61□□□□□ -0.07
PSMD9-211ENST00000544724 RSF1Q96T23 1441 aaPredicted RBP14.59□□□□□ -0.07
PSMD9-211ENST00000544724 YTHDC1Q96MU7 727 aaKnown RBP14.58□□□□□ -0.08
PSMD9-211ENST00000544724 DIEXFQ68CQ4 756 aaKnown RBP14.54□□□□□ -0.08
PSMD9-211ENST00000544724 RB1CC1Q8TDY2 1594 aa14.54□□□□□ -0.08
PSMD9-211ENST00000544724 SCRIBQ14160 1630 aa14.53□□□□□ -0.08
PSMD9-211ENST00000544724 ABCC9O60706 1549 aa14.46□□□□□ -0.1
PSMD9-211ENST00000544724 CENPBP07199 599 aaPredicted RBP14.39□□□□□ -0.11
PSMD9-211ENST00000544724 CECR2Q9BXF3 1484 aa14.37□□□□□ -0.11
PSMD9-211ENST00000544724 RANGAP1P46060 587 aaPredicted RBP14.28□□□□□ -0.12
PSMD9-211ENST00000544724 HNRNPUL2Q1KMD3 747 aaKnown RBP14.28□□□□□ -0.12
PSMD9-211ENST00000544724 MIER1Q8N108 512 aa14.27□□□□□ -0.13
PSMD9-211ENST00000544724 UBTFP17480 764 aaKnown RBP14.25□□□□□ -0.13
PSMD9-211ENST00000544724 MROH2BQ7Z745 1585 aa14.24□□□□□ -0.13
PSMD9-211ENST00000544724 ZNF316A6NFI3 1004 aaPredicted RBP14.22□□□□□ -0.13
PSMD9-211ENST00000544724 WIZO95785 1651 aa14.17□□□□□ -0.14
PSMD9-211ENST00000544724 ABCC8Q09428 1581 aa14.15□□□□□ -0.14
PSMD9-211ENST00000544724 CCDC88BA6NC98 1476 aa14.14□□□□□ -0.15
PSMD9-211ENST00000544724 SOGA1O94964 1423 aa14.13□□□□□ -0.15
PSMD9-211ENST00000544724 CEP162Q5TB80 1403 aa14.12□□□□□ -0.15
PSMD9-211ENST00000544724 RUSC2Q8N2Y8 1516 aa14.08□□□□□ -0.15
PSMD9-211ENST00000544724 CSRNP3Q8WYN3 585 aa14.02□□□□□ -0.17
PSMD9-211ENST00000544724 MYT1Q01538 1121 aa13.93□□□□□ -0.18
PSMD9-211ENST00000544724 WRNQ14191 1432 aaPredicted RBP eCLIP13.93□□□□□ -0.18
PSMD9-211ENST00000544724 TNIKQ9UKE5 1360 aa13.92□□□□□ -0.18
PSMD9-211ENST00000544724 BCANQ96GW7 911 aa13.92□□□□□ -0.18
PSMD9-211ENST00000544724 KCNH8Q96L42 1107 aa13.89□□□□□ -0.19
PSMD9-211ENST00000544724 APLP2Q06481 763 aa13.89□□□□□ -0.19
PSMD9-211ENST00000544724 ITGAEP38570 1179 aa13.88□□□□□ -0.19
PSMD9-211ENST00000544724 SUPT16HQ9Y5B9 1047 aaKnown RBP13.88□□□□□ -0.19
PSMD9-211ENST00000544724 PABPN1Q86U42 306 aaKnown RBP eCLIP13.87□□□□□ -0.19
PSMD9-211ENST00000544724 EIF4G1Q04637 1599 aaKnown RBP13.84□□□□□ -0.19
PSMD9-211ENST00000544724 BAZ1AQ9NRL2 1556 aaPredicted RBP13.84□□□□□ -0.19
PSMD9-211ENST00000544724 CLIP1P30622 1438 aa13.78□□□□□ -0.2
PSMD9-211ENST00000544724 GOLGA3Q08378 1498 aa13.77□□□□□ -0.21
PSMD9-211ENST00000544724 TSHZ2Q9NRE2 1034 aa13.77□□□□□ -0.21
PSMD9-211ENST00000544724 KANK4Q5T7N3 995 aaPredicted RBP13.75□□□□□ -0.21
PSMD9-211ENST00000544724 NACADO15069 1562 aa13.74□□□□□ -0.21
PSMD9-211ENST00000544724 SMARCA2P51531 1590 aa13.74□□□□□ -0.21
PSMD9-211ENST00000544724 HIRIP3Q9BW71 556 aaPredicted RBP13.73□□□□□ -0.21
PSMD9-211ENST00000544724 TOP2AP11388 1531 aaKnown RBP13.71□□□□□ -0.21
PSMD9-211ENST00000544724 RAPGEF2Q9Y4G8 1499 aa13.68□□□□□ -0.22
PSMD9-211ENST00000544724 DHX57Q6P158 1386 aaKnown RBP13.67□□□□□ -0.22
PSMD9-211ENST00000544724 FKBP8Q14318 412 aa13.66□□□□□ -0.22
PSMD9-211ENST00000544724 VPS8Q8N3P4 1428 aa13.65□□□□□ -0.22
PSMD9-211ENST00000544724 DDX10Q13206 875 aaKnown RBP13.64□□□□□ -0.23
PSMD9-211ENST00000544724 SMARCA4P51532 1647 aa13.63□□□□□ -0.23
PSMD9-211ENST00000544724 EEA1Q15075 1411 aa13.63□□□□□ -0.23
PSMD9-211ENST00000544724 TRIM52Q96A61 297 aa13.62□□□□□ -0.23
PSMD9-211ENST00000544724 ANP32EQ9BTT0 268 aa13.62□□□□□ -0.23
PSMD9-211ENST00000544724 CEP164Q9UPV0 1460 aa13.61□□□□□ -0.23
PSMD9-211ENST00000544724 SYNJ1O43426 1573 aa13.6□□□□□ -0.23
PSMD9-211ENST00000544724 SIN3AQ96ST3 1273 aa13.58□□□□□ -0.23
PSMD9-211ENST00000544724 BCL11AQ9H165 835 aa13.55□□□□□ -0.24
PSMD9-211ENST00000544724 KIF21BO75037 1637 aa13.55□□□□□ -0.24
PSMD9-211ENST00000544724 ATP1B4Q9UN42 357 aaPredicted RBP13.54□□□□□ -0.24
PSMD9-211ENST00000544724 IRX6P78412 446 aaPredicted RBP13.53□□□□□ -0.24
PSMD9-211ENST00000544724 FAM50AQ14320 339 aaKnown RBP13.48□□□□□ -0.25
PSMD9-211ENST00000544724 P3H3Q8IVL6 736 aa13.48□□□□□ -0.25
PSMD9-211ENST00000544724 RBM19Q9Y4C8 960 aaKnown RBP13.48□□□□□ -0.25
PSMD9-211ENST00000544724 ARAP1Q96P48 1450 aa13.44□□□□□ -0.26
PSMD9-211ENST00000544724 RAB3GAP2Q9H2M9 1393 aa13.43□□□□□ -0.26
PSMD9-211ENST00000544724 NEFLP07196 543 aa13.42□□□□□ -0.26
PSMD9-211ENST00000544724 CCNB3Q8WWL7 1395 aa13.41□□□□□ -0.26
PSMD9-211ENST00000544724 CLSPNQ9HAW4 1339 aa13.41□□□□□ -0.26
PSMD9-211ENST00000544724 MSH5O43196 834 aa13.38□□□□□ -0.27
PSMD9-211ENST00000544724 BAZ1BQ9UIG0 1483 aaKnown RBP13.36□□□□□ -0.27
PSMD9-211ENST00000544724 CNGB1Q14028 1251 aaPredicted RBP13.36□□□□□ -0.27
PSMD9-211ENST00000544724 UNC13AQ9UPW8 1703 aa13.35□□□□□ -0.27
PSMD9-211ENST00000544724 WDR97A6NE52 1622 aa13.35□□□□□ -0.27
PSMD9-211ENST00000544724 SENP3-EIF4A1A0A087X0R7 540 aa13.34□□□□□ -0.27
PSMD9-211ENST00000544724 ANP32CO43423 234 aa13.33□□□□□ -0.28
PSMD9-211ENST00000544724 PPP1R15AO75807 674 aaPredicted RBP13.33□□□□□ -0.28
PSMD9-211ENST00000544724 RRBP1Q9P2E9 1410 aaKnown RBP13.31□□□□□ -0.28
PSMD9-211ENST00000544724 MAPKBP1O60336 1514 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms