RNA–Protein interactions for RNA: ENST00000502559.1

SH3TC1-205, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 2

Gene SH3TC1, Length 3,798 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-205ENST00000502559 NISCHQ9Y2I1 1504 aa24■■□□□ 1.43
SH3TC1-205ENST00000502559 HRCP23327 699 aa22.13■■□□□ 1.13
SH3TC1-205ENST00000502559 PPARGC1BQ86YN6 1023 aaKnown RBP21.89■■□□□ 1.09
SH3TC1-205ENST00000502559 PCGF6Q9BYE7 350 aa21.81■■□□□ 1.08
SH3TC1-205ENST00000502559 SUPT5HO00267 1087 aaKnown RBP21.72■■□□□ 1.07
SH3TC1-205ENST00000502559 SHROOM4Q9ULL8 1493 aa21.66■■□□□ 1.06
SH3TC1-205ENST00000502559 PELP1Q8IZL8 1130 aaKnown RBP21.58■■□□□ 1.04
SH3TC1-205ENST00000502559 DCAF8L2P0C7V8 631 aa21.57■■□□□ 1.04
SH3TC1-205ENST00000502559 MYO15BQ96JP2 1530 aa21.27■■□□□ 1
SH3TC1-205ENST00000502559 CHIC1Q5VXU3 224 aa21.19■□□□□ 0.98
SH3TC1-205ENST00000502559 SCAF1Q9H7N4 1312 aaKnown RBP21.13■□□□□ 0.97
SH3TC1-205ENST00000502559 LOC105371045A0A1W2PR82 267 aa20.92■□□□□ 0.94
SH3TC1-205ENST00000502559 TRIM26Q12899 539 aaPredicted RBP20.85■□□□□ 0.93
SH3TC1-205ENST00000502559 MYT1Q01538 1121 aa20.74■□□□□ 0.91
SH3TC1-205ENST00000502559 DCAF1Q9Y4B6 1507 aa20.72■□□□□ 0.91
SH3TC1-205ENST00000502559 ZEB1P37275 1124 aaPredicted RBP20.68■□□□□ 0.9
SH3TC1-205ENST00000502559 NEUROD1Q13562 356 aa20.52■□□□□ 0.88
SH3TC1-205ENST00000502559 ACIN1Q9UKV3 1341 aaKnown RBP20.51■□□□□ 0.87
SH3TC1-205ENST00000502559 GTF3C3Q9Y5Q9 886 aa20.47■□□□□ 0.87
SH3TC1-205ENST00000502559 CCDC180Q9P1Z9 1646 aa20.43■□□□□ 0.86
SH3TC1-205ENST00000502559 CENPBP07199 599 aaPredicted RBP20.28■□□□□ 0.84
SH3TC1-205ENST00000502559 EHMT2Q96KQ7 1210 aa20.28■□□□□ 0.84
SH3TC1-205ENST00000502559 FAM9AQ8IZU1 332 aaPredicted RBP20.17■□□□□ 0.82
SH3TC1-205ENST00000502559 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.13■□□□□ 0.81
SH3TC1-205ENST00000502559 DIEXFQ68CQ4 756 aaKnown RBP20.13■□□□□ 0.81
SH3TC1-205ENST00000502559 ZCCHC6Q5VYS8 1495 aaKnown RBP20.12■□□□□ 0.81
SH3TC1-205ENST00000502559 CCER1Q8TC90 406 aaPredicted RBP20.09■□□□□ 0.81
SH3TC1-205ENST00000502559 SLC24A1O60721 1099 aa20.09■□□□□ 0.81
SH3TC1-205ENST00000502559 YTHDC1Q96MU7 727 aaKnown RBP20.05■□□□□ 0.8
SH3TC1-205ENST00000502559 TRIM41Q8WV44 630 aa19.93■□□□□ 0.78
SH3TC1-205ENST00000502559 ABCC9O60706 1549 aa19.92■□□□□ 0.78
SH3TC1-205ENST00000502559 TTBK1Q5TCY1 1321 aaPredicted RBP19.8■□□□□ 0.76
SH3TC1-205ENST00000502559 ZNF316A6NFI3 1004 aaPredicted RBP19.62■□□□□ 0.73
SH3TC1-205ENST00000502559 MIER1Q8N108 512 aa19.6■□□□□ 0.73
SH3TC1-205ENST00000502559 BCL11AQ9H165 835 aa19.6■□□□□ 0.73
SH3TC1-205ENST00000502559 PRKCSHP14314 528 aaPredicted RBP19.52■□□□□ 0.72
SH3TC1-205ENST00000502559 ANP32EQ9BTT0 268 aa19.44■□□□□ 0.7
SH3TC1-205ENST00000502559 PABPN1Q86U42 306 aaKnown RBP eCLIP19.39■□□□□ 0.69
SH3TC1-205ENST00000502559 SCRIBQ14160 1630 aa19.36■□□□□ 0.69
SH3TC1-205ENST00000502559 SUPT16HQ9Y5B9 1047 aaKnown RBP19.34■□□□□ 0.69
SH3TC1-205ENST00000502559 CSRNP3Q8WYN3 585 aa19.32■□□□□ 0.68
SH3TC1-205ENST00000502559 TSHZ2Q9NRE2 1034 aa19.31■□□□□ 0.68
SH3TC1-205ENST00000502559 RSF1Q96T23 1441 aaPredicted RBP19.22■□□□□ 0.67
SH3TC1-205ENST00000502559 HNRNPUL2Q1KMD3 747 aaKnown RBP19.2■□□□□ 0.66
SH3TC1-205ENST00000502559 ERICH6Q7L0X2 663 aa19.17■□□□□ 0.66
SH3TC1-205ENST00000502559 BCANQ96GW7 911 aa19.16■□□□□ 0.66
SH3TC1-205ENST00000502559 NACADO15069 1562 aa19.16■□□□□ 0.66
SH3TC1-205ENST00000502559 RB1CC1Q8TDY2 1594 aa19.15■□□□□ 0.66
SH3TC1-205ENST00000502559 CLSPNQ9HAW4 1339 aa19.05■□□□□ 0.64
SH3TC1-205ENST00000502559 UBTFP17480 764 aaKnown RBP18.98■□□□□ 0.63
SH3TC1-205ENST00000502559 CEP162Q5TB80 1403 aa18.94■□□□□ 0.62
SH3TC1-205ENST00000502559 FKBP8Q14318 412 aa18.91■□□□□ 0.62
SH3TC1-205ENST00000502559 WRNQ14191 1432 aaPredicted RBP eCLIP18.89■□□□□ 0.61
SH3TC1-205ENST00000502559 RBM19Q9Y4C8 960 aaKnown RBP18.87■□□□□ 0.61
SH3TC1-205ENST00000502559 CECR2Q9BXF3 1484 aa18.86■□□□□ 0.61
SH3TC1-205ENST00000502559 KCNH8Q96L42 1107 aa18.85■□□□□ 0.61
SH3TC1-205ENST00000502559 ITGAEP38570 1179 aa18.83■□□□□ 0.6
SH3TC1-205ENST00000502559 APLP2Q06481 763 aa18.76■□□□□ 0.59
SH3TC1-205ENST00000502559 RANGAP1P46060 587 aaPredicted RBP18.74■□□□□ 0.59
SH3TC1-205ENST00000502559 NEFLP07196 543 aa18.73■□□□□ 0.59
SH3TC1-205ENST00000502559 TNIKQ9UKE5 1360 aa18.71■□□□□ 0.59
SH3TC1-205ENST00000502559 MSH5O43196 834 aa18.69■□□□□ 0.58
SH3TC1-205ENST00000502559 SOGA1O94964 1423 aa18.67■□□□□ 0.58
SH3TC1-205ENST00000502559 MROH2BQ7Z745 1585 aa18.67■□□□□ 0.58
SH3TC1-205ENST00000502559 CCDC88BA6NC98 1476 aa18.66■□□□□ 0.58
SH3TC1-205ENST00000502559 DAXXQ9UER7 740 aaPredicted RBP18.65■□□□□ 0.58
SH3TC1-205ENST00000502559 ABCC8Q09428 1581 aa18.6■□□□□ 0.57
SH3TC1-205ENST00000502559 TRIM52Q96A61 297 aa18.6■□□□□ 0.57
SH3TC1-205ENST00000502559 DDX10Q13206 875 aaKnown RBP18.54■□□□□ 0.56
SH3TC1-205ENST00000502559 RUSC2Q8N2Y8 1516 aa18.54■□□□□ 0.56
SH3TC1-205ENST00000502559 DHX57Q6P158 1386 aaKnown RBP18.51■□□□□ 0.55
SH3TC1-205ENST00000502559 BAZ1AQ9NRL2 1556 aaPredicted RBP18.5■□□□□ 0.55
SH3TC1-205ENST00000502559 WIZO95785 1651 aa18.5■□□□□ 0.55
SH3TC1-205ENST00000502559 DEKP35659 375 aaKnown RBP18.48■□□□□ 0.55
SH3TC1-205ENST00000502559 IRX6P78412 446 aaPredicted RBP18.47■□□□□ 0.55
SH3TC1-205ENST00000502559 ANO8Q9HCE9 1232 aaPredicted RBP18.45■□□□□ 0.54
SH3TC1-205ENST00000502559 CDK11AQ9UQ88 783 aaPredicted RBP18.44■□□□□ 0.54
SH3TC1-205ENST00000502559 GOLGA3Q08378 1498 aa18.43■□□□□ 0.54
SH3TC1-205ENST00000502559 CLIP1P30622 1438 aa18.41■□□□□ 0.54
SH3TC1-205ENST00000502559 HIRIP3Q9BW71 556 aaPredicted RBP18.41■□□□□ 0.54
SH3TC1-205ENST00000502559 NBR1Q14596 966 aa18.39■□□□□ 0.53
SH3TC1-205ENST00000502559 FANCIQ9NVI1 1328 aa18.39■□□□□ 0.53
SH3TC1-205ENST00000502559 UNC13AQ9UPW8 1703 aa18.35■□□□□ 0.53
SH3TC1-205ENST00000502559 EEA1Q15075 1411 aa18.33■□□□□ 0.52
SH3TC1-205ENST00000502559 BICRAQ9NZM4 1560 aa18.32■□□□□ 0.52
SH3TC1-205ENST00000502559 VPS8Q8N3P4 1428 aa18.32■□□□□ 0.52
SH3TC1-205ENST00000502559 SMARCA4P51532 1647 aa18.31■□□□□ 0.52
SH3TC1-205ENST00000502559 EIF5BO60841 1220 aaKnown RBP18.3■□□□□ 0.52
SH3TC1-205ENST00000502559 ANP32CO43423 234 aa18.3■□□□□ 0.52
SH3TC1-205ENST00000502559 EIF4G1Q04637 1599 aaKnown RBP18.29■□□□□ 0.52
SH3TC1-205ENST00000502559 MYT1LQ9UL68 1186 aa18.28■□□□□ 0.52
SH3TC1-205ENST00000502559 CCDC136Q96JN2 1154 aa18.25■□□□□ 0.51
SH3TC1-205ENST00000502559 SALL2Q9Y467 1007 aaPredicted RBP18.25■□□□□ 0.51
SH3TC1-205ENST00000502559 KANK4Q5T7N3 995 aaPredicted RBP18.25■□□□□ 0.51
SH3TC1-205ENST00000502559 HNRNPUQ00839 825 aaKnown RBP eCLIP18.22■□□□□ 0.51
SH3TC1-205ENST00000502559 SIN3AQ96ST3 1273 aa18.21■□□□□ 0.51
SH3TC1-205ENST00000502559 RTN4Q9NQC3 1192 aaKnown RBP18.2■□□□□ 0.5
SH3TC1-205ENST00000502559 CEP164Q9UPV0 1460 aa18.19■□□□□ 0.5
SH3TC1-205ENST00000502559 PPP1R15AO75807 674 aaPredicted RBP18.18■□□□□ 0.5
SH3TC1-205ENST00000502559 TOP2AP11388 1531 aaKnown RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms