Protein–RNA interactions for Protein: P11836

MS4A1, B-lymphocyte antigen CD20, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A1P11836 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
MS4A1P11836 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
MS4A1P11836 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
MS4A1P11836 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
MS4A1P11836 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC26.32■■□□□ 1.8
MS4A1P11836 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC26.32■■□□□ 1.8
MS4A1P11836 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
MS4A1P11836 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
MS4A1P11836 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC26.32■■□□□ 1.8
MS4A1P11836 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
MS4A1P11836 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
MS4A1P11836 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
MS4A1P11836 AC097381.1-201ENST00000429019 1296 ntBASIC26.32■■□□□ 1.8
MS4A1P11836 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC26.32■■□□□ 1.8
MS4A1P11836 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC26.32■■□□□ 1.8
MS4A1P11836 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC26.32■■□□□ 1.8
MS4A1P11836 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
MS4A1P11836 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
MS4A1P11836 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC26.32■■□□□ 1.8
MS4A1P11836 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
MS4A1P11836 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC26.32■■□□□ 1.8
MS4A1P11836 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
MS4A1P11836 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
MS4A1P11836 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC26.31■■□□□ 1.8
MS4A1P11836 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC26.31■■□□□ 1.8
MS4A1P11836 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
MS4A1P11836 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
MS4A1P11836 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC26.31■■□□□ 1.8
MS4A1P11836 AC034268.1-201ENST00000441047 882 ntBASIC26.31■■□□□ 1.8
MS4A1P11836 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
MS4A1P11836 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
MS4A1P11836 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC26.31■■□□□ 1.8
MS4A1P11836 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
MS4A1P11836 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
MS4A1P11836 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
MS4A1P11836 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
MS4A1P11836 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC26.31■■□□□ 1.8
MS4A1P11836 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
MS4A1P11836 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC26.31■■□□□ 1.8
MS4A1P11836 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
MS4A1P11836 STAC-204ENST00000457375 1366 ntTSL 2 BASIC26.31■■□□□ 1.8
MS4A1P11836 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
MS4A1P11836 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
MS4A1P11836 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC26.3■■□□□ 1.8
MS4A1P11836 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC26.3■■□□□ 1.8
MS4A1P11836 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
MS4A1P11836 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
MS4A1P11836 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
MS4A1P11836 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC26.3■■□□□ 1.8
MS4A1P11836 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
MS4A1P11836 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
MS4A1P11836 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
MS4A1P11836 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
MS4A1P11836 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
MS4A1P11836 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC26.29■■□□□ 1.8
MS4A1P11836 AC116050.2-201ENST00000612102 1779 ntBASIC26.29■■□□□ 1.8
MS4A1P11836 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC26.29■■□□□ 1.8
MS4A1P11836 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC26.29■■□□□ 1.8
MS4A1P11836 MIR6821-201ENST00000617625 74 ntBASIC26.29■■□□□ 1.8
MS4A1P11836 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC26.29■■□□□ 1.8
MS4A1P11836 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
MS4A1P11836 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
MS4A1P11836 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC26.29■■□□□ 1.8
MS4A1P11836 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC26.29■■□□□ 1.8
MS4A1P11836 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC26.29■■□□□ 1.8
MS4A1P11836 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
MS4A1P11836 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
MS4A1P11836 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
MS4A1P11836 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC26.28■■□□□ 1.8
MS4A1P11836 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
MS4A1P11836 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
MS4A1P11836 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
MS4A1P11836 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
MS4A1P11836 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
MS4A1P11836 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
MS4A1P11836 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC26.28■■□□□ 1.8
MS4A1P11836 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
MS4A1P11836 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
MS4A1P11836 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
MS4A1P11836 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
MS4A1P11836 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
MS4A1P11836 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
MS4A1P11836 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
MS4A1P11836 PTPA-214ENST00000423100 988 ntTSL 2 BASIC26.27■■□□□ 1.8
MS4A1P11836 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC26.27■■□□□ 1.8
MS4A1P11836 TFG-210ENST00000620299 1289 ntTSL 5 BASIC26.27■■□□□ 1.8
MS4A1P11836 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
MS4A1P11836 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC26.27■■□□□ 1.8
MS4A1P11836 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
MS4A1P11836 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
MS4A1P11836 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
MS4A1P11836 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC26.27■■□□□ 1.8
MS4A1P11836 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
MS4A1P11836 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC26.26■■□□□ 1.79
MS4A1P11836 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC26.26■■□□□ 1.79
MS4A1P11836 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
MS4A1P11836 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC26.26■■□□□ 1.79
MS4A1P11836 RBM17P2-201ENST00000616397 1405 ntBASIC26.26■■□□□ 1.79
MS4A1P11836 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
MS4A1P11836 AC019069.1-201ENST00000610008 1333 ntBASIC26.26■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms