Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
RARAP10276 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
RARAP10276 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RARAP10276 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.53■■□□□ 1.04
RARAP10276 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RARAP10276 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.53■■□□□ 1.04
RARAP10276 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
RARAP10276 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.53■■□□□ 1.04
RARAP10276 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.53■■□□□ 1.04
RARAP10276 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC21.53■■□□□ 1.04
RARAP10276 FP700111.2-201ENST00000619190 1892 ntBASIC21.53■■□□□ 1.04
RARAP10276 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.53■■□□□ 1.04
RARAP10276 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
RARAP10276 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RARAP10276 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RARAP10276 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RARAP10276 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.52■■□□□ 1.04
RARAP10276 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RARAP10276 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.52■■□□□ 1.04
RARAP10276 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.52■■□□□ 1.04
RARAP10276 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.52■■□□□ 1.04
RARAP10276 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
RARAP10276 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.52■■□□□ 1.04
RARAP10276 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.52■■□□□ 1.04
RARAP10276 PCDHAC2-203ENST00000615316 3011 ntBASIC21.52■■□□□ 1.04
RARAP10276 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.04
RARAP10276 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
RARAP10276 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.03
RARAP10276 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.03
RARAP10276 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.03
RARAP10276 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC21.51■■□□□ 1.03
RARAP10276 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
RARAP10276 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
RARAP10276 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.51■■□□□ 1.03
RARAP10276 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RARAP10276 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.51■■□□□ 1.03
RARAP10276 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.51■■□□□ 1.03
RARAP10276 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
RARAP10276 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RARAP10276 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC21.51■■□□□ 1.03
RARAP10276 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.51■■□□□ 1.03
RARAP10276 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RARAP10276 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
RARAP10276 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
RARAP10276 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RARAP10276 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.51■■□□□ 1.03
RARAP10276 AC026271.2-201ENST00000428091 497 ntBASIC21.51■■□□□ 1.03
RARAP10276 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.51■■□□□ 1.03
RARAP10276 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
RARAP10276 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
RARAP10276 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.51■■□□□ 1.03
RARAP10276 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
RARAP10276 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.51■■□□□ 1.03
RARAP10276 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RARAP10276 AC019069.1-201ENST00000610008 1333 ntBASIC21.51■■□□□ 1.03
RARAP10276 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RARAP10276 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RARAP10276 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC21.5■■□□□ 1.03
RARAP10276 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RARAP10276 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
RARAP10276 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
RARAP10276 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RARAP10276 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RARAP10276 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.5■■□□□ 1.03
RARAP10276 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RARAP10276 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
RARAP10276 SLC7A5P1-201ENST00000568957 537 ntBASIC21.5■■□□□ 1.03
RARAP10276 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.5■■□□□ 1.03
RARAP10276 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RARAP10276 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
RARAP10276 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RARAP10276 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RARAP10276 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RARAP10276 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RARAP10276 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RARAP10276 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.49■■□□□ 1.03
RARAP10276 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.49■■□□□ 1.03
RARAP10276 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.49■■□□□ 1.03
RARAP10276 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.49■■□□□ 1.03
RARAP10276 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.49■■□□□ 1.03
RARAP10276 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.49■■□□□ 1.03
RARAP10276 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.49■■□□□ 1.03
RARAP10276 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RARAP10276 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.49■■□□□ 1.03
RARAP10276 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RARAP10276 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
RARAP10276 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RARAP10276 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RARAP10276 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.49■■□□□ 1.03
RARAP10276 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RARAP10276 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
RARAP10276 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.48■■□□□ 1.03
RARAP10276 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.48■■□□□ 1.03
RARAP10276 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.48■■□□□ 1.03
RARAP10276 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC21.48■■□□□ 1.03
RARAP10276 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RARAP10276 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RARAP10276 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.48■■□□□ 1.03
RARAP10276 UBE2DNL-204ENST00000602536 740 ntBASIC21.48■■□□□ 1.03
RARAP10276 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms