Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 TSPY13P-201ENST00000338964 914 ntBASIC15.9■□□□□ 0.14
CXCL1P09341 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC15.9■□□□□ 0.14
CXCL1P09341 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CXCL1P09341 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC15.9■□□□□ 0.14
CXCL1P09341 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
CXCL1P09341 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CXCL1P09341 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC15.9■□□□□ 0.14
CXCL1P09341 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CXCL1P09341 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CXCL1P09341 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC15.9■□□□□ 0.14
CXCL1P09341 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CXCL1P09341 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CXCL1P09341 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CXCL1P09341 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC15.89■□□□□ 0.13
CXCL1P09341 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CXCL1P09341 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
CXCL1P09341 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CXCL1P09341 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
CXCL1P09341 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC15.89■□□□□ 0.13
CXCL1P09341 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CXCL1P09341 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CXCL1P09341 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC15.89■□□□□ 0.13
CXCL1P09341 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CXCL1P09341 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC15.89■□□□□ 0.13
CXCL1P09341 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC15.89■□□□□ 0.13
CXCL1P09341 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC15.89■□□□□ 0.13
CXCL1P09341 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CXCL1P09341 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
CXCL1P09341 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC15.89■□□□□ 0.13
CXCL1P09341 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CXCL1P09341 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CXCL1P09341 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
CXCL1P09341 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CXCL1P09341 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CXCL1P09341 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CXCL1P09341 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CXCL1P09341 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
CXCL1P09341 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
CXCL1P09341 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CXCL1P09341 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC15.88■□□□□ 0.13
CXCL1P09341 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CXCL1P09341 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CXCL1P09341 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CXCL1P09341 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC15.88■□□□□ 0.13
CXCL1P09341 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CXCL1P09341 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CXCL1P09341 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CXCL1P09341 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CXCL1P09341 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC15.88■□□□□ 0.13
CXCL1P09341 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC15.88■□□□□ 0.13
CXCL1P09341 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CXCL1P09341 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CXCL1P09341 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CXCL1P09341 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC15.88■□□□□ 0.13
CXCL1P09341 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC15.88■□□□□ 0.13
CXCL1P09341 CLTA-210ENST00000540080 989 ntTSL 2 BASIC15.88■□□□□ 0.13
CXCL1P09341 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CXCL1P09341 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CXCL1P09341 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC15.88■□□□□ 0.13
CXCL1P09341 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC15.88■□□□□ 0.13
CXCL1P09341 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CXCL1P09341 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CXCL1P09341 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC15.88■□□□□ 0.13
CXCL1P09341 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC15.88■□□□□ 0.13
CXCL1P09341 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CXCL1P09341 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CXCL1P09341 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CXCL1P09341 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CXCL1P09341 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CXCL1P09341 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
CXCL1P09341 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC15.87■□□□□ 0.13
CXCL1P09341 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
CXCL1P09341 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CXCL1P09341 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CXCL1P09341 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC15.87■□□□□ 0.13
CXCL1P09341 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC15.87■□□□□ 0.13
CXCL1P09341 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
CXCL1P09341 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CXCL1P09341 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC15.87■□□□□ 0.13
CXCL1P09341 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC15.87■□□□□ 0.13
CXCL1P09341 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CXCL1P09341 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
CXCL1P09341 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
CXCL1P09341 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CXCL1P09341 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CXCL1P09341 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
CXCL1P09341 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CXCL1P09341 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
CXCL1P09341 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
CXCL1P09341 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CXCL1P09341 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC15.86■□□□□ 0.13
CXCL1P09341 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CXCL1P09341 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
CXCL1P09341 NKILA-201ENST00000613231 537 ntTSL 4 BASIC15.86■□□□□ 0.13
CXCL1P09341 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
CXCL1P09341 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CXCL1P09341 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC15.86■□□□□ 0.13
CXCL1P09341 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
CXCL1P09341 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CXCL1P09341 BID-203ENST00000399765 1879 ntTSL 2 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms