Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
VAPBO95292 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.6■□□□□ 0.89
VAPBO95292 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
VAPBO95292 AC034268.1-201ENST00000441047 882 ntBASIC20.6■□□□□ 0.89
VAPBO95292 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
VAPBO95292 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
VAPBO95292 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.6■□□□□ 0.89
VAPBO95292 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.6■□□□□ 0.89
VAPBO95292 SLC7A5P1-201ENST00000568957 537 ntBASIC20.6■□□□□ 0.89
VAPBO95292 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
VAPBO95292 MIR6821-201ENST00000617625 74 ntBASIC20.6■□□□□ 0.89
VAPBO95292 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
VAPBO95292 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VAPBO95292 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
VAPBO95292 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VAPBO95292 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
VAPBO95292 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VAPBO95292 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
VAPBO95292 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VAPBO95292 AC019069.1-201ENST00000610008 1333 ntBASIC20.59■□□□□ 0.89
VAPBO95292 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
VAPBO95292 AC020907.5-201ENST00000624372 1936 ntBASIC20.59■□□□□ 0.89
VAPBO95292 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VAPBO95292 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
VAPBO95292 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VAPBO95292 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.59■□□□□ 0.89
VAPBO95292 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
VAPBO95292 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.59■□□□□ 0.89
VAPBO95292 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.59■□□□□ 0.89
VAPBO95292 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
VAPBO95292 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
VAPBO95292 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.59■□□□□ 0.89
VAPBO95292 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
VAPBO95292 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
VAPBO95292 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.59■□□□□ 0.89
VAPBO95292 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.59■□□□□ 0.89
VAPBO95292 AC087623.3-201ENST00000607047 1098 ntBASIC20.59■□□□□ 0.89
VAPBO95292 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
VAPBO95292 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VAPBO95292 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
VAPBO95292 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
VAPBO95292 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.59■□□□□ 0.89
VAPBO95292 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.59■□□□□ 0.89
VAPBO95292 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
VAPBO95292 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.59■□□□□ 0.89
VAPBO95292 RBM17P2-201ENST00000616397 1405 ntBASIC20.59■□□□□ 0.89
VAPBO95292 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
VAPBO95292 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.59■□□□□ 0.89
VAPBO95292 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.59■□□□□ 0.89
VAPBO95292 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VAPBO95292 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VAPBO95292 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.58■□□□□ 0.89
VAPBO95292 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
VAPBO95292 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
VAPBO95292 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.58■□□□□ 0.89
VAPBO95292 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.58■□□□□ 0.89
VAPBO95292 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.58■□□□□ 0.89
VAPBO95292 UBE2DNL-204ENST00000602536 740 ntBASIC20.58■□□□□ 0.89
VAPBO95292 AC243732.1-201ENST00000612648 864 ntBASIC20.58■□□□□ 0.89
VAPBO95292 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
VAPBO95292 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
VAPBO95292 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
VAPBO95292 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
VAPBO95292 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
VAPBO95292 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.58■□□□□ 0.88
VAPBO95292 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
VAPBO95292 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
VAPBO95292 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.57■□□□□ 0.88
VAPBO95292 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VAPBO95292 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.57■□□□□ 0.88
VAPBO95292 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
VAPBO95292 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.57■□□□□ 0.88
VAPBO95292 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VAPBO95292 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
VAPBO95292 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VAPBO95292 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VAPBO95292 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
VAPBO95292 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.57■□□□□ 0.88
VAPBO95292 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.57■□□□□ 0.88
VAPBO95292 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.57■□□□□ 0.88
VAPBO95292 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
VAPBO95292 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
VAPBO95292 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VAPBO95292 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
VAPBO95292 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
VAPBO95292 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
VAPBO95292 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
VAPBO95292 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
VAPBO95292 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VAPBO95292 AC091799.1-201ENST00000422823 811 ntBASIC20.56■□□□□ 0.88
VAPBO95292 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.56■□□□□ 0.88
VAPBO95292 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.56■□□□□ 0.88
VAPBO95292 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.56■□□□□ 0.88
VAPBO95292 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.56■□□□□ 0.88
VAPBO95292 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
VAPBO95292 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.56■□□□□ 0.88
VAPBO95292 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.56■□□□□ 0.88
VAPBO95292 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
VAPBO95292 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.56■□□□□ 0.88
VAPBO95292 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms