Protein–RNA interactions for Protein: O43448

KCNAB3, Voltage-gated potassium channel subunit beta-3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNAB3O43448 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC17.35■□□□□ 0.37
KCNAB3O43448 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
KCNAB3O43448 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KCNAB3O43448 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.35■□□□□ 0.37
KCNAB3O43448 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.35■□□□□ 0.37
KCNAB3O43448 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
KCNAB3O43448 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KCNAB3O43448 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KCNAB3O43448 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KCNAB3O43448 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KCNAB3O43448 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.34■□□□□ 0.37
KCNAB3O43448 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KCNAB3O43448 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
KCNAB3O43448 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
KCNAB3O43448 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
KCNAB3O43448 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC17.34■□□□□ 0.37
KCNAB3O43448 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC17.34■□□□□ 0.37
KCNAB3O43448 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.34■□□□□ 0.37
KCNAB3O43448 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KCNAB3O43448 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KCNAB3O43448 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KCNAB3O43448 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
KCNAB3O43448 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.34■□□□□ 0.37
KCNAB3O43448 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KCNAB3O43448 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
KCNAB3O43448 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
KCNAB3O43448 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
KCNAB3O43448 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
KCNAB3O43448 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.33■□□□□ 0.37
KCNAB3O43448 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC17.33■□□□□ 0.37
KCNAB3O43448 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
KCNAB3O43448 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC17.33■□□□□ 0.37
KCNAB3O43448 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
KCNAB3O43448 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
KCNAB3O43448 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
KCNAB3O43448 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
KCNAB3O43448 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC17.33■□□□□ 0.36
KCNAB3O43448 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC17.33■□□□□ 0.36
KCNAB3O43448 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.33■□□□□ 0.36
KCNAB3O43448 AC026185.1-201ENST00000445748 174 ntBASIC17.33■□□□□ 0.36
KCNAB3O43448 IGHV3-19-201ENST00000521488 291 ntBASIC17.33■□□□□ 0.36
KCNAB3O43448 AC010525.1-201ENST00000585559 441 ntBASIC17.33■□□□□ 0.36
KCNAB3O43448 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC17.33■□□□□ 0.36
KCNAB3O43448 AC073111.5-205ENST00000641717 521 ntBASIC17.33■□□□□ 0.36
KCNAB3O43448 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
KCNAB3O43448 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.33■□□□□ 0.36
KCNAB3O43448 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
KCNAB3O43448 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
KCNAB3O43448 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
KCNAB3O43448 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.32■□□□□ 0.36
KCNAB3O43448 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC17.32■□□□□ 0.36
KCNAB3O43448 OXCT2P1-201ENST00000447263 1535 ntBASIC17.32■□□□□ 0.36
KCNAB3O43448 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KCNAB3O43448 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KCNAB3O43448 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KCNAB3O43448 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
KCNAB3O43448 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KCNAB3O43448 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
KCNAB3O43448 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC17.32■□□□□ 0.36
KCNAB3O43448 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
KCNAB3O43448 AC123595.1-201ENST00000440769 1046 ntBASIC17.32■□□□□ 0.36
KCNAB3O43448 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
KCNAB3O43448 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KCNAB3O43448 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC17.32■□□□□ 0.36
KCNAB3O43448 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.32■□□□□ 0.36
KCNAB3O43448 CCDC92B-201ENST00000575506 885 ntBASIC17.32■□□□□ 0.36
KCNAB3O43448 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC17.32■□□□□ 0.36
KCNAB3O43448 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
KCNAB3O43448 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KCNAB3O43448 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
KCNAB3O43448 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KCNAB3O43448 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KCNAB3O43448 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
KCNAB3O43448 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
KCNAB3O43448 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
KCNAB3O43448 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KCNAB3O43448 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
KCNAB3O43448 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
KCNAB3O43448 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
KCNAB3O43448 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.31■□□□□ 0.36
KCNAB3O43448 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.31■□□□□ 0.36
KCNAB3O43448 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
KCNAB3O43448 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KCNAB3O43448 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
KCNAB3O43448 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC17.31■□□□□ 0.36
KCNAB3O43448 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
KCNAB3O43448 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
KCNAB3O43448 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
KCNAB3O43448 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC17.31■□□□□ 0.36
KCNAB3O43448 PARP1-210ENST00000629232 477 ntTSL 5 BASIC17.31■□□□□ 0.36
KCNAB3O43448 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
KCNAB3O43448 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KCNAB3O43448 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
KCNAB3O43448 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KCNAB3O43448 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
KCNAB3O43448 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
KCNAB3O43448 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KCNAB3O43448 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
KCNAB3O43448 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KCNAB3O43448 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms