Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CACNA1AO00555 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CACNA1AO00555 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CACNA1AO00555 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.62■□□□□ 0.73
CACNA1AO00555 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CACNA1AO00555 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CACNA1AO00555 AC092183.1-201ENST00000469884 875 ntBASIC19.62■□□□□ 0.73
CACNA1AO00555 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.62■□□□□ 0.73
CACNA1AO00555 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
CACNA1AO00555 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.62■□□□□ 0.73
CACNA1AO00555 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.62■□□□□ 0.73
CACNA1AO00555 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CACNA1AO00555 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.62■□□□□ 0.73
CACNA1AO00555 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.62■□□□□ 0.73
CACNA1AO00555 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.62■□□□□ 0.73
CACNA1AO00555 AL355385.1-201ENST00000606123 409 ntBASIC19.62■□□□□ 0.73
CACNA1AO00555 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.62■□□□□ 0.73
CACNA1AO00555 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.62■□□□□ 0.73
CACNA1AO00555 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CACNA1AO00555 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CACNA1AO00555 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CACNA1AO00555 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.61■□□□□ 0.73
CACNA1AO00555 TSPY14P-201ENST00000303979 915 ntBASIC19.61■□□□□ 0.73
CACNA1AO00555 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC19.61■□□□□ 0.73
CACNA1AO00555 AP005242.2-201ENST00000580065 1175 ntBASIC19.61■□□□□ 0.73
CACNA1AO00555 AC069148.1-201ENST00000608741 768 ntBASIC19.61■□□□□ 0.73
CACNA1AO00555 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.61■□□□□ 0.73
CACNA1AO00555 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CACNA1AO00555 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CACNA1AO00555 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CACNA1AO00555 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CACNA1AO00555 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CACNA1AO00555 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CACNA1AO00555 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.61■□□□□ 0.73
CACNA1AO00555 AC139887.4-201ENST00000607877 719 ntBASIC19.61■□□□□ 0.73
CACNA1AO00555 AC008622.2-201ENST00000617006 1229 ntBASIC19.61■□□□□ 0.73
CACNA1AO00555 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC19.61■□□□□ 0.73
CACNA1AO00555 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.61■□□□□ 0.73
CACNA1AO00555 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CACNA1AO00555 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CACNA1AO00555 LINC00526-201ENST00000581067 1875 ntBASIC19.6■□□□□ 0.73
CACNA1AO00555 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CACNA1AO00555 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CACNA1AO00555 AC092647.4-201ENST00000457211 535 ntBASIC19.6■□□□□ 0.73
CACNA1AO00555 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.6■□□□□ 0.73
CACNA1AO00555 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.6■□□□□ 0.73
CACNA1AO00555 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CACNA1AO00555 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CACNA1AO00555 IER3-202ENST00000376377 1350 ntBASIC19.6■□□□□ 0.73
CACNA1AO00555 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CACNA1AO00555 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CACNA1AO00555 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CACNA1AO00555 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.6■□□□□ 0.73
CACNA1AO00555 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CACNA1AO00555 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
CACNA1AO00555 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CACNA1AO00555 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.6■□□□□ 0.73
CACNA1AO00555 AC079089.2-201ENST00000531211 1277 ntBASIC19.6■□□□□ 0.73
CACNA1AO00555 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CACNA1AO00555 HOTTIP_1.1-201ENST00000620415 57 ntBASIC19.6■□□□□ 0.73
CACNA1AO00555 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CACNA1AO00555 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CACNA1AO00555 NBPF21P-201ENST00000425093 1451 ntBASIC19.59■□□□□ 0.73
CACNA1AO00555 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CACNA1AO00555 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CACNA1AO00555 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.59■□□□□ 0.73
CACNA1AO00555 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC19.59■□□□□ 0.73
CACNA1AO00555 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
CACNA1AO00555 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.59■□□□□ 0.73
CACNA1AO00555 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CACNA1AO00555 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.59■□□□□ 0.73
CACNA1AO00555 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.59■□□□□ 0.73
CACNA1AO00555 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.59■□□□□ 0.73
CACNA1AO00555 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.59■□□□□ 0.73
CACNA1AO00555 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
CACNA1AO00555 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
CACNA1AO00555 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CACNA1AO00555 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.58■□□□□ 0.73
CACNA1AO00555 AC026271.3-201ENST00000571884 352 ntBASIC19.58■□□□□ 0.73
CACNA1AO00555 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.58■□□□□ 0.73
CACNA1AO00555 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CACNA1AO00555 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
CACNA1AO00555 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
CACNA1AO00555 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.58■□□□□ 0.73
CACNA1AO00555 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CACNA1AO00555 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CACNA1AO00555 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CACNA1AO00555 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.72
CACNA1AO00555 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC19.58■□□□□ 0.72
CACNA1AO00555 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.58■□□□□ 0.72
CACNA1AO00555 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.72
CACNA1AO00555 AL671883.3-201ENST00000603274 991 ntBASIC19.58■□□□□ 0.72
CACNA1AO00555 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CACNA1AO00555 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CACNA1AO00555 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CACNA1AO00555 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.57■□□□□ 0.72
CACNA1AO00555 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.57■□□□□ 0.72
CACNA1AO00555 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.57■□□□□ 0.72
CACNA1AO00555 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CACNA1AO00555 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms