Protein–RNA interactions for Protein: B2RNG4

TRIM6-TRIM34, TRIM6-TRIM34 readthrough, humanhuman

Predictions only

Length 842 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-TRIM34B2RNG4 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC25.09■■□□□ 1.61
TRIM6-TRIM34B2RNG4 WWOX-218ENST00000627394 894 ntTSL 5 BASIC25.09■■□□□ 1.61
TRIM6-TRIM34B2RNG4 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
TRIM6-TRIM34B2RNG4 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
TRIM6-TRIM34B2RNG4 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
TRIM6-TRIM34B2RNG4 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC25.09■■□□□ 1.61
TRIM6-TRIM34B2RNG4 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC25.08■■□□□ 1.61
TRIM6-TRIM34B2RNG4 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC25.08■■□□□ 1.61
TRIM6-TRIM34B2RNG4 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
TRIM6-TRIM34B2RNG4 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
TRIM6-TRIM34B2RNG4 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
TRIM6-TRIM34B2RNG4 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC25.08■■□□□ 1.61
TRIM6-TRIM34B2RNG4 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
TRIM6-TRIM34B2RNG4 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
TRIM6-TRIM34B2RNG4 TERF1P5-201ENST00000477545 1207 ntBASIC25.08■■□□□ 1.61
TRIM6-TRIM34B2RNG4 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
TRIM6-TRIM34B2RNG4 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
TRIM6-TRIM34B2RNG4 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC25.08■■□□□ 1.61
TRIM6-TRIM34B2RNG4 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC25.08■■□□□ 1.61
TRIM6-TRIM34B2RNG4 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.61
TRIM6-TRIM34B2RNG4 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
TRIM6-TRIM34B2RNG4 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC25.08■■□□□ 1.6
TRIM6-TRIM34B2RNG4 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC25.08■■□□□ 1.6
TRIM6-TRIM34B2RNG4 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC25.07■■□□□ 1.6
TRIM6-TRIM34B2RNG4 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
TRIM6-TRIM34B2RNG4 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC25.07■■□□□ 1.6
TRIM6-TRIM34B2RNG4 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
TRIM6-TRIM34B2RNG4 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
TRIM6-TRIM34B2RNG4 ME3-201ENST00000323418 1068 ntTSL 5 BASIC25.07■■□□□ 1.6
TRIM6-TRIM34B2RNG4 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
TRIM6-TRIM34B2RNG4 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC25.07■■□□□ 1.6
TRIM6-TRIM34B2RNG4 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC25.07■■□□□ 1.6
TRIM6-TRIM34B2RNG4 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
TRIM6-TRIM34B2RNG4 AC092667.1-201ENST00000434301 2586 ntBASIC25.07■■□□□ 1.6
TRIM6-TRIM34B2RNG4 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
TRIM6-TRIM34B2RNG4 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC25.07■■□□□ 1.6
TRIM6-TRIM34B2RNG4 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
TRIM6-TRIM34B2RNG4 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
TRIM6-TRIM34B2RNG4 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
TRIM6-TRIM34B2RNG4 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
TRIM6-TRIM34B2RNG4 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC25.07■■□□□ 1.6
TRIM6-TRIM34B2RNG4 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
TRIM6-TRIM34B2RNG4 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC25.06■■□□□ 1.6
TRIM6-TRIM34B2RNG4 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
TRIM6-TRIM34B2RNG4 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC25.06■■□□□ 1.6
TRIM6-TRIM34B2RNG4 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
TRIM6-TRIM34B2RNG4 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC25.06■■□□□ 1.6
TRIM6-TRIM34B2RNG4 UQCRFS1P1-201ENST00000435169 820 ntBASIC25.06■■□□□ 1.6
TRIM6-TRIM34B2RNG4 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC25.06■■□□□ 1.6
TRIM6-TRIM34B2RNG4 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
TRIM6-TRIM34B2RNG4 MFSD11-216ENST00000590393 1141 ntBASIC25.06■■□□□ 1.6
TRIM6-TRIM34B2RNG4 AC022517.1-201ENST00000592429 346 ntBASIC25.06■■□□□ 1.6
TRIM6-TRIM34B2RNG4 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
TRIM6-TRIM34B2RNG4 AC073314.1-201ENST00000568729 2216 ntBASIC25.06■■□□□ 1.6
TRIM6-TRIM34B2RNG4 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
TRIM6-TRIM34B2RNG4 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
TRIM6-TRIM34B2RNG4 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC25.06■■□□□ 1.6
TRIM6-TRIM34B2RNG4 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
TRIM6-TRIM34B2RNG4 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
TRIM6-TRIM34B2RNG4 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
TRIM6-TRIM34B2RNG4 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC25.05■■□□□ 1.6
TRIM6-TRIM34B2RNG4 BID-203ENST00000399765 1879 ntTSL 2 BASIC25.05■■□□□ 1.6
TRIM6-TRIM34B2RNG4 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
TRIM6-TRIM34B2RNG4 AC007322.3-201ENST00000426526 701 ntBASIC25.05■■□□□ 1.6
TRIM6-TRIM34B2RNG4 AC006015.1-201ENST00000429970 570 ntBASIC25.05■■□□□ 1.6
TRIM6-TRIM34B2RNG4 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
TRIM6-TRIM34B2RNG4 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
TRIM6-TRIM34B2RNG4 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
TRIM6-TRIM34B2RNG4 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
TRIM6-TRIM34B2RNG4 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
TRIM6-TRIM34B2RNG4 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
TRIM6-TRIM34B2RNG4 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
TRIM6-TRIM34B2RNG4 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC25.04■■□□□ 1.6
TRIM6-TRIM34B2RNG4 AC027702.1-201ENST00000563810 1770 ntBASIC25.04■■□□□ 1.6
TRIM6-TRIM34B2RNG4 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
TRIM6-TRIM34B2RNG4 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
TRIM6-TRIM34B2RNG4 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
TRIM6-TRIM34B2RNG4 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
TRIM6-TRIM34B2RNG4 CD44-222ENST00000526025 1052 ntTSL 2 BASIC25.04■■□□□ 1.6
TRIM6-TRIM34B2RNG4 AC011767.1-201ENST00000617410 1153 ntBASIC25.04■■□□□ 1.6
TRIM6-TRIM34B2RNG4 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC25.04■■□□□ 1.6
TRIM6-TRIM34B2RNG4 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC25.04■■□□□ 1.6
TRIM6-TRIM34B2RNG4 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
TRIM6-TRIM34B2RNG4 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
TRIM6-TRIM34B2RNG4 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
TRIM6-TRIM34B2RNG4 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
TRIM6-TRIM34B2RNG4 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
TRIM6-TRIM34B2RNG4 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
TRIM6-TRIM34B2RNG4 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC25.03■■□□□ 1.6
TRIM6-TRIM34B2RNG4 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
TRIM6-TRIM34B2RNG4 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
TRIM6-TRIM34B2RNG4 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
TRIM6-TRIM34B2RNG4 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC25.03■■□□□ 1.6
TRIM6-TRIM34B2RNG4 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC25.03■■□□□ 1.6
TRIM6-TRIM34B2RNG4 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
TRIM6-TRIM34B2RNG4 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
TRIM6-TRIM34B2RNG4 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
TRIM6-TRIM34B2RNG4 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC25.03■■□□□ 1.6
TRIM6-TRIM34B2RNG4 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
TRIM6-TRIM34B2RNG4 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms