Protein–RNA interactions for Protein: A0A075B6N2

TRBV20-1, T-cell receptor beta variable 20-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV20-1A0A075B6N2 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
TRBV20-1A0A075B6N2 SSSCA1-AS1-201ENST00000567594 614 ntBASIC13.73□□□□□ -0.21
TRBV20-1A0A075B6N2 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV20-1A0A075B6N2 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV20-1A0A075B6N2 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC13.73□□□□□ -0.21
TRBV20-1A0A075B6N2 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV20-1A0A075B6N2 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC13.73□□□□□ -0.21
TRBV20-1A0A075B6N2 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV20-1A0A075B6N2 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC13.73□□□□□ -0.21
TRBV20-1A0A075B6N2 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC13.73□□□□□ -0.21
TRBV20-1A0A075B6N2 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
TRBV20-1A0A075B6N2 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV20-1A0A075B6N2 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV20-1A0A075B6N2 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV20-1A0A075B6N2 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV20-1A0A075B6N2 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV20-1A0A075B6N2 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV20-1A0A075B6N2 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC13.72□□□□□ -0.21
TRBV20-1A0A075B6N2 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV20-1A0A075B6N2 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV20-1A0A075B6N2 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
TRBV20-1A0A075B6N2 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV20-1A0A075B6N2 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC13.72□□□□□ -0.21
TRBV20-1A0A075B6N2 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC13.72□□□□□ -0.21
TRBV20-1A0A075B6N2 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV20-1A0A075B6N2 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV20-1A0A075B6N2 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC13.72□□□□□ -0.21
TRBV20-1A0A075B6N2 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV20-1A0A075B6N2 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
TRBV20-1A0A075B6N2 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV20-1A0A075B6N2 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV20-1A0A075B6N2 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV20-1A0A075B6N2 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV20-1A0A075B6N2 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV20-1A0A075B6N2 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV20-1A0A075B6N2 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC13.72□□□□□ -0.21
TRBV20-1A0A075B6N2 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
TRBV20-1A0A075B6N2 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV20-1A0A075B6N2 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV20-1A0A075B6N2 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV20-1A0A075B6N2 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV20-1A0A075B6N2 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
TRBV20-1A0A075B6N2 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC13.72□□□□□ -0.21
TRBV20-1A0A075B6N2 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV20-1A0A075B6N2 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC13.72□□□□□ -0.21
TRBV20-1A0A075B6N2 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV20-1A0A075B6N2 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV20-1A0A075B6N2 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV20-1A0A075B6N2 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
TRBV20-1A0A075B6N2 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV20-1A0A075B6N2 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV20-1A0A075B6N2 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV20-1A0A075B6N2 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV20-1A0A075B6N2 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
TRBV20-1A0A075B6N2 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
TRBV20-1A0A075B6N2 AL138781.2-201ENST00000617896 1843 ntBASIC13.71□□□□□ -0.21
TRBV20-1A0A075B6N2 AP000997.3-201ENST00000623333 2250 ntBASIC13.71□□□□□ -0.21
TRBV20-1A0A075B6N2 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
TRBV20-1A0A075B6N2 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV20-1A0A075B6N2 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC13.71□□□□□ -0.21
TRBV20-1A0A075B6N2 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC13.71□□□□□ -0.21
TRBV20-1A0A075B6N2 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV20-1A0A075B6N2 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV20-1A0A075B6N2 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV20-1A0A075B6N2 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV20-1A0A075B6N2 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV20-1A0A075B6N2 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV20-1A0A075B6N2 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV20-1A0A075B6N2 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
TRBV20-1A0A075B6N2 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC13.71□□□□□ -0.22
TRBV20-1A0A075B6N2 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
TRBV20-1A0A075B6N2 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.22
TRBV20-1A0A075B6N2 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRBV20-1A0A075B6N2 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC13.71□□□□□ -0.22
TRBV20-1A0A075B6N2 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRBV20-1A0A075B6N2 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
TRBV20-1A0A075B6N2 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC13.7□□□□□ -0.22
TRBV20-1A0A075B6N2 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV20-1A0A075B6N2 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
TRBV20-1A0A075B6N2 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV20-1A0A075B6N2 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
TRBV20-1A0A075B6N2 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC13.7□□□□□ -0.22
TRBV20-1A0A075B6N2 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC13.7□□□□□ -0.22
TRBV20-1A0A075B6N2 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC13.7□□□□□ -0.22
TRBV20-1A0A075B6N2 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV20-1A0A075B6N2 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV20-1A0A075B6N2 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV20-1A0A075B6N2 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV20-1A0A075B6N2 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV20-1A0A075B6N2 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV20-1A0A075B6N2 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
TRBV20-1A0A075B6N2 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV20-1A0A075B6N2 PLK5-205ENST00000642079 1969 ntBASIC13.7□□□□□ -0.22
TRBV20-1A0A075B6N2 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV20-1A0A075B6N2 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV20-1A0A075B6N2 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC13.7□□□□□ -0.22
TRBV20-1A0A075B6N2 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC13.7□□□□□ -0.22
TRBV20-1A0A075B6N2 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV20-1A0A075B6N2 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV20-1A0A075B6N2 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms