Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 RNA5SP40-201ENST00000517147 110 ntBASIC9.59□□□□□ -0.87
SLC1A1P43005 KRT18P59-201ENST00000524879 1231 ntBASIC9.59□□□□□ -0.87
SLC1A1P43005 AC116456.1-202ENST00000528151 597 ntTSL 4 BASIC9.59□□□□□ -0.87
SLC1A1P43005 OR7E11P-201ENST00000532901 952 ntBASIC9.59□□□□□ -0.87
SLC1A1P43005 AP003170.1-201ENST00000536944 1030 ntBASIC9.59□□□□□ -0.87
SLC1A1P43005 AC068305.3-201ENST00000547590 555 ntTSL 4 BASIC9.59□□□□□ -0.87
SLC1A1P43005 TRBV7-1-201ENST00000547918 380 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
SLC1A1P43005 AC027277.2-201ENST00000566325 435 ntTSL 3 BASIC9.59□□□□□ -0.87
SLC1A1P43005 AC099518.5-201ENST00000567236 1137 ntTSL 3 BASIC9.59□□□□□ -0.87
SLC1A1P43005 ARL17A-204ENST00000570550 491 ntAPPRIS ALT2 TSL 3 BASIC9.59□□□□□ -0.87
SLC1A1P43005 ARL17B-204ENST00000571246 491 ntTSL 3 BASIC9.59□□□□□ -0.87
SLC1A1P43005 AC127521.1-201ENST00000576086 854 ntTSL 3 BASIC9.59□□□□□ -0.87
SLC1A1P43005 AC016629.3-201ENST00000596029 519 ntTSL 3 BASIC9.59□□□□□ -0.87
SLC1A1P43005 MIR6760-201ENST00000617342 68 ntBASIC9.59□□□□□ -0.87
SLC1A1P43005 AC007529.2-201ENST00000637435 1094 ntTSL 5 BASIC9.59□□□□□ -0.87
SLC1A1P43005 FAM166B-207ENST00000639789 651 ntTSL 2 BASIC9.59□□□□□ -0.87
SLC1A1P43005 HIPK2-201ENST00000342645 2937 ntTSL 5 BASIC9.59□□□□□ -0.87
SLC1A1P43005 AC110769.2-201ENST00000602760 1548 ntBASIC9.59□□□□□ -0.87
SLC1A1P43005 CLUAP1-212ENST00000576634 4163 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
SLC1A1P43005 ERG-201ENST00000288319 4919 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
SLC1A1P43005 ZSCAN32-201ENST00000304926 3027 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
SLC1A1P43005 FAXDC2-201ENST00000326080 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
SLC1A1P43005 ETV3-202ENST00000368192 5254 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
SLC1A1P43005 EFNA5-201ENST00000333274 5335 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
SLC1A1P43005 ZSCAN30-201ENST00000333206 4097 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
SLC1A1P43005 KALRN-201ENST00000240874 6537 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
SLC1A1P43005 KALRN-211ENST00000460856 6509 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
SLC1A1P43005 CD33-204ENST00000436584 1494 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
SLC1A1P43005 XCR1-201ENST00000309285 5281 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
SLC1A1P43005 DGKK-201ENST00000611977 7407 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
SLC1A1P43005 LNP1-203ENST00000489752 1813 ntTSL 5 BASIC9.59□□□□□ -0.88
SLC1A1P43005 RPLP0P2-206ENST00000496593 3525 ntTSL 2 BASIC9.59□□□□□ -0.88
SLC1A1P43005 IL2RA-202ENST00000379954 1562 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
SLC1A1P43005 P2RY10-204ENST00000544091 1597 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
SLC1A1P43005 POLR1B-203ENST00000409894 4457 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
SLC1A1P43005 C1QTNF7-204ENST00000429690 4464 ntAPPRIS P1 TSL 4 BASIC9.58□□□□□ -0.88
SLC1A1P43005 AC209007.1-201ENST00000401075 1342 ntBASIC9.58□□□□□ -0.88
SLC1A1P43005 LINC02418-202ENST00000567788 4592 ntTSL 2 BASIC9.58□□□□□ -0.88
SLC1A1P43005 ACBD5-204ENST00000375905 3848 ntAPPRIS P3 TSL 2 BASIC9.58□□□□□ -0.88
SLC1A1P43005 WWC1-209ENST00000521089 3562 ntAPPRIS ALT1 TSL 2 BASIC9.58□□□□□ -0.88
SLC1A1P43005 SLFN13-211ENST00000542635 5921 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
SLC1A1P43005 GRB10-209ENST00000406641 2700 ntTSL 5 BASIC9.58□□□□□ -0.88
SLC1A1P43005 SMARCAL1-202ENST00000358207 3056 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
SLC1A1P43005 IARS2P1-201ENST00000508226 3173 ntBASIC9.58□□□□□ -0.88
SLC1A1P43005 PALM2-AKAP2-202ENST00000374530 7507 ntTSL 2 BASIC9.58□□□□□ -0.88
SLC1A1P43005 ADAMTS9-AS1-206ENST00000493124 1511 ntTSL 5 BASIC9.58□□□□□ -0.88
SLC1A1P43005 TRIM53AP-201ENST00000532014 1544 ntBASIC9.58□□□□□ -0.88
SLC1A1P43005 AC021054.1-201ENST00000537514 2338 ntTSL 2 BASIC9.58□□□□□ -0.88
SLC1A1P43005 RNF170-202ENST00000319073 1265 ntTSL 2 BASIC9.58□□□□□ -0.88
SLC1A1P43005 TREM1-202ENST00000334475 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
SLC1A1P43005 NOVA1-201ENST00000344429 896 ntTSL 2 BASIC9.58□□□□□ -0.88
SLC1A1P43005 SPINK4-202ENST00000379725 533 ntTSL 3 BASIC9.58□□□□□ -0.88
SLC1A1P43005 NIFKP1-201ENST00000398317 889 ntBASIC9.58□□□□□ -0.88
SLC1A1P43005 AL117350.1-201ENST00000418348 640 ntTSL 2 BASIC9.58□□□□□ -0.88
SLC1A1P43005 LINC01399-201ENST00000423311 648 ntTSL 3 BASIC9.58□□□□□ -0.88
SLC1A1P43005 RPSAP33-201ENST00000432315 865 ntBASIC9.58□□□□□ -0.88
SLC1A1P43005 AL009172.1-201ENST00000436365 1098 ntBASIC9.58□□□□□ -0.88
SLC1A1P43005 AC136896.1-201ENST00000438334 547 ntBASIC9.58□□□□□ -0.88
SLC1A1P43005 AC007557.2-201ENST00000440900 583 ntTSL 2 BASIC9.58□□□□□ -0.88
SLC1A1P43005 AC093166.1-201ENST00000442243 330 ntBASIC9.58□□□□□ -0.88
SLC1A1P43005 FAM197Y9-203ENST00000505707 345 ntBASIC9.58□□□□□ -0.88
SLC1A1P43005 MRVI1-AS1-201ENST00000525578 829 ntTSL 3 BASIC9.58□□□□□ -0.88
SLC1A1P43005 RTN4IP1-204ENST00000539449 814 ntTSL 2 BASIC9.58□□□□□ -0.88
SLC1A1P43005 COX7B2-204ENST00000543208 587 ntAPPRIS ALT1 TSL 5 BASIC9.58□□□□□ -0.88
SLC1A1P43005 AC020612.1-201ENST00000547655 541 ntBASIC9.58□□□□□ -0.88
SLC1A1P43005 SMCO4P1-201ENST00000592909 177 ntBASIC9.58□□□□□ -0.88
SLC1A1P43005 AC016629.3-202ENST00000596427 890 ntTSL 2 BASIC9.58□□□□□ -0.88
SLC1A1P43005 AC010978.1-206ENST00000598281 828 ntTSL 5 BASIC9.58□□□□□ -0.88
SLC1A1P43005 ZNF675-207ENST00000600313 543 ntTSL 4 BASIC9.58□□□□□ -0.88
SLC1A1P43005 AC121493.1-201ENST00000602316 450 ntBASIC9.58□□□□□ -0.88
SLC1A1P43005 AC008875.1-201ENST00000607715 811 ntBASIC9.58□□□□□ -0.88
SLC1A1P43005 FAM197Y4-201ENST00000616275 467 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
SLC1A1P43005 GRIA3-206ENST00000616590 784 ntTSL 2 BASIC9.58□□□□□ -0.88
SLC1A1P43005 SYN3-213ENST00000619146 561 ntTSL 5 BASIC9.58□□□□□ -0.88
SLC1A1P43005 FAM197Y5-203ENST00000619815 467 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
SLC1A1P43005 AC106774.10-201ENST00000638486 599 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
SLC1A1P43005 ARHGEF9-222ENST00000636048 5059 ntTSL 5 BASIC9.58□□□□□ -0.88
SLC1A1P43005 AC026887.1-201ENST00000624657 2985 ntBASIC9.58□□□□□ -0.88
SLC1A1P43005 CARD8-216ENST00000520153 2617 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
SLC1A1P43005 SEC24A-202ENST00000398844 6299 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
SLC1A1P43005 KLHL1-202ENST00000545028 3966 ntTSL 2 BASIC9.58□□□□□ -0.88
SLC1A1P43005 AC009403.2-202ENST00000636307 3956 ntTSL 5 BASIC9.58□□□□□ -0.88
SLC1A1P43005 KCNH5-204ENST00000420622 2711 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
SLC1A1P43005 LINC00598-213ENST00000637438 1456 ntTSL 5 BASIC9.58□□□□□ -0.88
SLC1A1P43005 AC114980.1-201ENST00000505668 3157 ntBASIC9.58□□□□□ -0.88
SLC1A1P43005 STXBP5-204ENST00000367481 9177 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
SLC1A1P43005 NFASC-204ENST00000401399 10205 ntAPPRIS ALT1 TSL 1 (best) BASIC9.58□□□□□ -0.88
SLC1A1P43005 CD46-202ENST00000322918 3124 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
SLC1A1P43005 NLRP1-204ENST00000354411 4332 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
SLC1A1P43005 CD300LD-201ENST00000375352 1303 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
SLC1A1P43005 MOSPD2-204ENST00000482354 1870 ntTSL 5 BASIC9.57□□□□□ -0.88
SLC1A1P43005 CD164-201ENST00000275080 2954 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
SLC1A1P43005 OSBPL3-203ENST00000396431 2969 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
SLC1A1P43005 YES1-205ENST00000584307 4639 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
SLC1A1P43005 ZNF583-202ENST00000333201 4916 ntAPPRIS P1 TSL 2 BASIC9.57□□□□□ -0.88
SLC1A1P43005 LINC02072-201ENST00000441895 2645 ntTSL 2 BASIC9.57□□□□□ -0.88
SLC1A1P43005 ARID4A-201ENST00000348476 5562 ntTSL 5 BASIC9.57□□□□□ -0.88
SLC1A1P43005 AC009303.4-201ENST00000623784 1500 ntBASIC9.57□□□□□ -0.88
SLC1A1P43005 SCD-201ENST00000370355 5362 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
SLC1A1P43005 AL445665.1-201ENST00000322495 2599 ntTSL 2 BASIC9.57□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms