Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 COL6A4P1-201ENST00000446690 2336 ntTSL 2 BASIC8.53□□□□□ -1.04
SNX18Q96RF0 CAST-213ENST00000504465 2336 ntAPPRIS ALT2 TSL 2 BASIC8.53□□□□□ -1.04
SNX18Q96RF0 STRAP-201ENST00000025399 1442 ntTSL 2 BASIC8.53□□□□□ -1.04
SNX18Q96RF0 RMND1-201ENST00000336451 1413 ntTSL 2 BASIC8.53□□□□□ -1.04
SNX18Q96RF0 NLRP3-201ENST00000336119 4170 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
SNX18Q96RF0 VCAN-208ENST00000512590 5923 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
SNX18Q96RF0 CHAC2-201ENST00000295304 1321 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
SNX18Q96RF0 RGS6-219ENST00000622468 5453 ntTSL 5 BASIC8.53□□□□□ -1.04
SNX18Q96RF0 PRICKLE2-AS1-201ENST00000482609 6505 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
SNX18Q96RF0 ILDR2-201ENST00000271417 13140 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
SNX18Q96RF0 TP63-202ENST00000320472 2032 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
SNX18Q96RF0 TP63-210ENST00000440651 2031 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
SNX18Q96RF0 TXNRD1-219ENST00000529546 2018 ntTSL 2 BASIC8.53□□□□□ -1.04
SNX18Q96RF0 UBLCP1-201ENST00000296786 2392 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
SNX18Q96RF0 ZNF239-201ENST00000306006 2389 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
SNX18Q96RF0 GFM2-202ENST00000345239 2856 ntTSL 1 (best) BASIC8.52□□□□□ -1.04
SNX18Q96RF0 MED1-202ENST00000394287 2870 ntTSL 1 (best) BASIC8.52□□□□□ -1.04
SNX18Q96RF0 MEF2C-203ENST00000437473 4340 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
SNX18Q96RF0 MGAT5-201ENST00000281923 8144 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
SNX18Q96RF0 TP63-212ENST00000456148 1749 ntAPPRIS ALT1 TSL 5 BASIC8.52□□□□□ -1.05
SNX18Q96RF0 CCT2-203ENST00000544368 1728 ntTSL 5 BASIC8.52□□□□□ -1.05
SNX18Q96RF0 KRBA2-201ENST00000331336 1964 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
SNX18Q96RF0 LINC01641-202ENST00000445817 1971 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
SNX18Q96RF0 DCTN6-201ENST00000221114 1127 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
SNX18Q96RF0 ZC3H15-201ENST00000337859 2138 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
SNX18Q96RF0 KRTDAP-201ENST00000338897 491 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
SNX18Q96RF0 AL445248.1-201ENST00000366152 624 ntTSL 3 BASIC8.52□□□□□ -1.05
SNX18Q96RF0 TRAF3IP3-201ENST00000367023 1065 ntTSL 3 BASIC8.52□□□□□ -1.05
SNX18Q96RF0 U3.16-201ENST00000384391 209 ntBASIC8.52□□□□□ -1.05
SNX18Q96RF0 RNA5SP377-201ENST00000390852 112 ntBASIC8.52□□□□□ -1.05
SNX18Q96RF0 RNA5SP376-201ENST00000390949 112 ntBASIC8.52□□□□□ -1.05
SNX18Q96RF0 TPT1P4-201ENST00000403538 519 ntBASIC8.52□□□□□ -1.05
SNX18Q96RF0 AP000233.2-202ENST00000418942 684 ntTSL 5 BASIC8.52□□□□□ -1.05
SNX18Q96RF0 AL929410.1-201ENST00000428250 154 ntBASIC8.52□□□□□ -1.05
SNX18Q96RF0 SNHG14-204ENST00000441592 608 ntTSL 2 BASIC8.52□□□□□ -1.05
SNX18Q96RF0 CCR5-202ENST00000445772 1292 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
SNX18Q96RF0 AP000290.1-201ENST00000450830 449 ntTSL 2 BASIC8.52□□□□□ -1.05
SNX18Q96RF0 AC013480.1-201ENST00000451514 346 ntTSL 5 BASIC8.52□□□□□ -1.05
SNX18Q96RF0 PSMB3P2-201ENST00000457237 618 ntBASIC8.52□□□□□ -1.05
SNX18Q96RF0 PGAM4-201ENST00000458128 765 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
SNX18Q96RF0 AF241726.2-201ENST00000465127 954 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
SNX18Q96RF0 KRTDAP-203ENST00000484218 451 ntTSL 2 BASIC8.52□□□□□ -1.05
SNX18Q96RF0 DCTN6-203ENST00000520829 880 ntTSL 2 BASIC8.52□□□□□ -1.05
SNX18Q96RF0 AC091144.2-201ENST00000521717 433 ntBASIC8.52□□□□□ -1.05
SNX18Q96RF0 AC109635.2-201ENST00000525654 524 ntTSL 3 BASIC8.52□□□□□ -1.05
SNX18Q96RF0 TUBB4BP4-201ENST00000527023 304 ntBASIC8.52□□□□□ -1.05
SNX18Q96RF0 AP001880.1-201ENST00000538772 421 ntBASIC8.52□□□□□ -1.05
SNX18Q96RF0 LINC01579-206ENST00000556928 657 ntTSL 3 BASIC8.52□□□□□ -1.05
SNX18Q96RF0 IGKV2D-28-202ENST00000558026 306 ntBASIC8.52□□□□□ -1.05
SNX18Q96RF0 AC103739.2-201ENST00000559839 807 ntTSL 4 BASIC8.52□□□□□ -1.05
SNX18Q96RF0 AC092718.2-201ENST00000562315 487 ntTSL 3 BASIC8.52□□□□□ -1.05
SNX18Q96RF0 ZNF207-207ENST00000577908 4672 ntAPPRIS ALT1 TSL 5 BASIC8.52□□□□□ -1.05
SNX18Q96RF0 AC015688.7-201ENST00000580276 664 ntBASIC8.52□□□□□ -1.05
SNX18Q96RF0 AC010319.5-201ENST00000598950 759 ntBASIC8.52□□□□□ -1.05
SNX18Q96RF0 LYPLA2P2-201ENST00000600506 676 ntBASIC8.52□□□□□ -1.05
SNX18Q96RF0 SPCS1-205ENST00000602728 832 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
SNX18Q96RF0 AL137246.1-201ENST00000607072 977 ntBASIC8.52□□□□□ -1.05
SNX18Q96RF0 TRBV7-9-201ENST00000612787 347 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
SNX18Q96RF0 AC007551.2-201ENST00000613889 389 ntBASIC8.52□□□□□ -1.05
SNX18Q96RF0 Z99916.3-201ENST00000623422 1080 ntBASIC8.52□□□□□ -1.05
SNX18Q96RF0 AP003500.1-201ENST00000626400 527 ntTSL 4 BASIC8.52□□□□□ -1.05
SNX18Q96RF0 AC015978.1-201ENST00000635343 890 ntBASIC8.52□□□□□ -1.05
SNX18Q96RF0 AC183088.2-201ENST00000637451 883 ntBASIC8.52□□□□□ -1.05
SNX18Q96RF0 CPNE8-201ENST00000331366 3489 ntAPPRIS P2 TSL 1 (best) BASIC8.52□□□□□ -1.05
SNX18Q96RF0 CCL28-203ENST00000513525 1518 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
SNX18Q96RF0 IYD-201ENST00000229447 7513 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
SNX18Q96RF0 GABRB3-216ENST00000628124 5581 ntTSL 2 BASIC8.52□□□□□ -1.05
SNX18Q96RF0 ARNTL2-202ENST00000266503 2291 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
SNX18Q96RF0 C11orf54-201ENST00000331239 2522 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
SNX18Q96RF0 SRPK1-205ENST00000423325 4357 ntTSL 2 BASIC8.52□□□□□ -1.05
SNX18Q96RF0 QTRT2-201ENST00000281273 4023 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
SNX18Q96RF0 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
SNX18Q96RF0 AC012409.5-201ENST00000624746 3424 ntBASIC8.52□□□□□ -1.05
SNX18Q96RF0 ABCE1-201ENST00000296577 3921 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
SNX18Q96RF0 RUNX1T1-248ENST00000613302 7687 ntAPPRIS P3 TSL 5 BASIC8.52□□□□□ -1.05
SNX18Q96RF0 GIGYF2-201ENST00000373563 5847 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
SNX18Q96RF0 ARID4A-201ENST00000348476 5562 ntTSL 5 BASIC8.52□□□□□ -1.05
SNX18Q96RF0 LRRC4C-202ENST00000527150 3085 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
SNX18Q96RF0 PLEKHG4B-201ENST00000283426 11515 ntAPPRIS P2 TSL 1 (best) BASIC8.52□□□□□ -1.05
SNX18Q96RF0 PLEKHG1-201ENST00000358517 7138 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
SNX18Q96RF0 STEAP3-AS1-201ENST00000454260 3218 ntTSL 2 BASIC8.52□□□□□ -1.05
SNX18Q96RF0 CAST-204ENST00000341926 2487 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
SNX18Q96RF0 CA5B-204ENST00000454127 2205 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
SNX18Q96RF0 AC104447.1-201ENST00000624214 2124 ntBASIC8.51□□□□□ -1.05
SNX18Q96RF0 CYP2G1P-201ENST00000252909 2511 ntTSL 2 BASIC8.51□□□□□ -1.05
SNX18Q96RF0 AP001020.2-201ENST00000581712 1605 ntBASIC8.51□□□□□ -1.05
SNX18Q96RF0 AL390195.2-201ENST00000564771 2023 ntBASIC8.51□□□□□ -1.05
SNX18Q96RF0 CD46-206ENST00000360212 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
SNX18Q96RF0 ITK-201ENST00000422843 4528 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
SNX18Q96RF0 TMCC1-201ENST00000393238 5992 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
SNX18Q96RF0 DENND2A-208ENST00000492720 3614 ntTSL 5 BASIC8.51□□□□□ -1.05
SNX18Q96RF0 MAGI1-IT1-201ENST00000460754 2567 ntTSL 2 BASIC8.51□□□□□ -1.05
SNX18Q96RF0 ZNF75BP-201ENST00000546499 1524 ntBASIC8.51□□□□□ -1.05
SNX18Q96RF0 ARMC8-218ENST00000485396 1920 ntTSL 2 BASIC8.51□□□□□ -1.05
SNX18Q96RF0 EIF3K-201ENST00000248342 864 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
SNX18Q96RF0 KRTAP9-8-201ENST00000254072 960 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
SNX18Q96RF0 H2AFV-203ENST00000349299 596 ntTSL 2 BASIC8.51□□□□□ -1.05
SNX18Q96RF0 DMRTC1B-202ENST00000373532 1100 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
SNX18Q96RF0 CALM2-202ENST00000409563 770 ntTSL 5 BASIC8.51□□□□□ -1.05
SNX18Q96RF0 LINC01890-201ENST00000415448 1017 ntTSL 2 BASIC8.51□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms