RNA–Protein interactions for RNA: ENST00000403538.1

TPT1P4-201, Transcript of tumor protein, translationally-controlled 1 pseudogene 4, humanhuman

BASIC

Gene TPT1P4, Length 519 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1P4-201ENST00000403538 AEBP2Q6ZN18 517 aaPredicted RBP30.45■■■□□ 2.47
TPT1P4-201ENST00000403538 CHIC1Q5VXU3 224 aa28.51■■■□□ 2.15
TPT1P4-201ENST00000403538 SENP3Q9H4L4 574 aaPredicted RBP26.13■■□□□ 1.77
TPT1P4-201ENST00000403538 PHF23Q9BUL5 403 aaPredicted RBP25.68■■□□□ 1.7
TPT1P4-201ENST00000403538 FOXD1Q16676 465 aa24.37■■□□□ 1.49
TPT1P4-201ENST00000403538 POTEDQ86YR6 584 aa23.44■■□□□ 1.34
TPT1P4-201ENST00000403538 MSH5O43196 834 aa23.09■■□□□ 1.29
TPT1P4-201ENST00000403538 PIAS4Q8N2W9 510 aaPredicted RBP22.61■■□□□ 1.21
TPT1P4-201ENST00000403538 PLPPR3Q6T4P5 718 aa22.47■■□□□ 1.19
TPT1P4-201ENST00000403538 PPP6R1Q9UPN7 881 aa22.34■■□□□ 1.17
TPT1P4-201ENST00000403538 ADRA2BP18089 450 aa22.21■■□□□ 1.15
TPT1P4-201ENST00000403538 DMRT2Q9Y5R5 561 aa20.63■□□□□ 0.89
TPT1P4-201ENST00000403538 MAPK8IP2Q13387 824 aaPredicted RBP20.57■□□□□ 0.88
TPT1P4-201ENST00000403538 SCAF1Q9H7N4 1312 aaKnown RBP20.44■□□□□ 0.86
TPT1P4-201ENST00000403538 NISCHQ9Y2I1 1504 aa20.39■□□□□ 0.85
TPT1P4-201ENST00000403538 CACNB1Q02641 598 aaPredicted RBP20.09■□□□□ 0.81
TPT1P4-201ENST00000403538 DCAF8L1A6NGE4 600 aa19.68■□□□□ 0.74
TPT1P4-201ENST00000403538 HOXD11P31277 338 aaPredicted RBP19.68■□□□□ 0.74
TPT1P4-201ENST00000403538 RNF39Q9H2S5 420 aa19.64■□□□□ 0.73
TPT1P4-201ENST00000403538 PPP4R3CPQ6ZMV5 832 aa19.58■□□□□ 0.72
TPT1P4-201ENST00000403538 CNKSR2Q8WXI2 1034 aa19.39■□□□□ 0.69
TPT1P4-201ENST00000403538 RNF216Q9NWF9 866 aaPredicted RBP19.37■□□□□ 0.69
TPT1P4-201ENST00000403538 C1QBPQ07021 282 aaKnown RBP19.35■□□□□ 0.69
TPT1P4-201ENST00000403538 DNAJC5BQ9UF47 199 aa19.23■□□□□ 0.67
TPT1P4-201ENST00000403538 NCBP3Q53F19 620 aaKnown RBP18.71■□□□□ 0.59
TPT1P4-201ENST00000403538 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.67■□□□□ 0.58
TPT1P4-201ENST00000403538 NPM3O75607 178 aaKnown RBP18.37■□□□□ 0.53
TPT1P4-201ENST00000403538 POTEHQ6S545 545 aa18.26■□□□□ 0.51
TPT1P4-201ENST00000403538 U3KPZ7 1027 aaPredicted RBP18.22■□□□□ 0.51
TPT1P4-201ENST00000403538 DSG3P32926 999 aa18.17■□□□□ 0.5
TPT1P4-201ENST00000403538 CAPN15O75808 1086 aa18.09■□□□□ 0.49
TPT1P4-201ENST00000403538 SPINK5Q9NQ38 1064 aaPredicted RBP18.09■□□□□ 0.49
TPT1P4-201ENST00000403538 CCDC180Q9P1Z9 1646 aa17.78■□□□□ 0.44
TPT1P4-201ENST00000403538 APLP2Q06481 763 aa17.74■□□□□ 0.43
TPT1P4-201ENST00000403538 SLC4A2P04920 1241 aa17.71■□□□□ 0.43
TPT1P4-201ENST00000403538 ZNF219Q9P2Y4 722 aaPredicted RBP17.69■□□□□ 0.42
TPT1P4-201ENST00000403538 TRHP20396 242 aaPredicted RBP17.65■□□□□ 0.42
TPT1P4-201ENST00000403538 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.59■□□□□ 0.41
TPT1P4-201ENST00000403538 HNRNPUL2Q1KMD3 747 aaKnown RBP17.59■□□□□ 0.41
TPT1P4-201ENST00000403538 ABCB7O75027 752 aa17.57■□□□□ 0.4
TPT1P4-201ENST00000403538 KCNA4P22459 653 aa17.49■□□□□ 0.39
TPT1P4-201ENST00000403538 SAMD1Q6SPF0 538 aaPredicted RBP17.44■□□□□ 0.38
TPT1P4-201ENST00000403538 RBM42Q9BTD8 480 aaKnown RBP17.4■□□□□ 0.38
TPT1P4-201ENST00000403538 CHRDL2Q6WN34 429 aa17.19■□□□□ 0.34
TPT1P4-201ENST00000403538 ZCCHC6Q5VYS8 1495 aaKnown RBP17.18■□□□□ 0.34
TPT1P4-201ENST00000403538 POLA2Q14181 598 aa17.09■□□□□ 0.33
TPT1P4-201ENST00000403538 DCAF1Q9Y4B6 1507 aa17.06■□□□□ 0.32
TPT1P4-201ENST00000403538 MYCNP04198 464 aaPredicted RBP17.04■□□□□ 0.32
TPT1P4-201ENST00000403538 AKT1S1Q96B36 256 aa16.88■□□□□ 0.29
TPT1P4-201ENST00000403538 SP7Q8TDD2 431 aaPredicted RBP16.86■□□□□ 0.29
TPT1P4-201ENST00000403538 MYO15BQ96JP2 1530 aa16.84■□□□□ 0.29
TPT1P4-201ENST00000403538 ZBTB12Q9Y330 459 aaPredicted RBP16.77■□□□□ 0.28
TPT1P4-201ENST00000403538 REM2Q8IYK8 340 aaPredicted RBP16.68■□□□□ 0.26
TPT1P4-201ENST00000403538 PIP4P2Q8N4L2 257 aa16.66■□□□□ 0.26
TPT1P4-201ENST00000403538 ATF5Q9Y2D1 282 aaPredicted RBP16.63■□□□□ 0.25
TPT1P4-201ENST00000403538 FOXD4L1Q9NU39 408 aa16.54■□□□□ 0.24
TPT1P4-201ENST00000403538 FXR2P51116 673 aaKnown RBP eCLIP16.52■□□□□ 0.24
TPT1P4-201ENST00000403538 OSCARQ8IYS5 282 aa16.52■□□□□ 0.24
TPT1P4-201ENST00000403538 NACADO15069 1562 aa16.51■□□□□ 0.23
TPT1P4-201ENST00000403538 HAX1O00165 279 aa16.49■□□□□ 0.23
TPT1P4-201ENST00000403538 PITPNM1O00562 1244 aa16.48■□□□□ 0.23
TPT1P4-201ENST00000403538 DCAF8L2P0C7V8 631 aa16.46■□□□□ 0.23
TPT1P4-201ENST00000403538 SHROOM4Q9ULL8 1493 aa16.42■□□□□ 0.22
TPT1P4-201ENST00000403538 SLC4A1APQ9BWU0 796 aaKnown RBP16.41■□□□□ 0.22
TPT1P4-201ENST00000403538 ABCC9O60706 1549 aa16.26■□□□□ 0.19
TPT1P4-201ENST00000403538 RB1CC1Q8TDY2 1594 aa16.25■□□□□ 0.19
TPT1P4-201ENST00000403538 EVX2Q03828 476 aa16.23■□□□□ 0.19
TPT1P4-201ENST00000403538 SPDYE2BA6NHP3 402 aa16.19■□□□□ 0.18
TPT1P4-201ENST00000403538 SPDYE6P0CI01 402 aa16.19■□□□□ 0.18
TPT1P4-201ENST00000403538 SPDYE2Q495Y8 402 aa16.19■□□□□ 0.18
TPT1P4-201ENST00000403538 ATXN8OSP0DMR3 200 aa16.18■□□□□ 0.18
TPT1P4-201ENST00000403538 FBLN2P98095 1184 aa16.08■□□□□ 0.16
TPT1P4-201ENST00000403538 SCRIBQ14160 1630 aa16.08■□□□□ 0.16
TPT1P4-201ENST00000403538 ZBTB22O15209 634 aa16.06■□□□□ 0.16
TPT1P4-201ENST00000403538 PRKAR2AP13861 404 aaKnown RBP16.04■□□□□ 0.16
TPT1P4-201ENST00000403538 SPDYE1Q8NFV5 336 aaPredicted RBP16.04■□□□□ 0.16
TPT1P4-201ENST00000403538 SUPT5HO00267 1087 aaKnown RBP16.02■□□□□ 0.16
TPT1P4-201ENST00000403538 C19orf67A6NJJ6 358 aa16■□□□□ 0.15
TPT1P4-201ENST00000403538 CLEC11AQ9Y240 323 aa15.95■□□□□ 0.14
TPT1P4-201ENST00000403538 SSUH2Q9Y2M2 353 aa15.9■□□□□ 0.14
TPT1P4-201ENST00000403538 GABBR2O75899 941 aa15.87■□□□□ 0.13
TPT1P4-201ENST00000403538 MKRN4PQ13434 485 aaPredicted RBP15.86■□□□□ 0.13
TPT1P4-201ENST00000403538 ZNF692Q9BU19 519 aaPredicted RBP15.86■□□□□ 0.13
TPT1P4-201ENST00000403538 RSF1Q96T23 1441 aaPredicted RBP15.85■□□□□ 0.13
TPT1P4-201ENST00000403538 LHX8Q68G74 356 aa15.81■□□□□ 0.12
TPT1P4-201ENST00000403538 UNC13AQ9UPW8 1703 aa15.77■□□□□ 0.12
TPT1P4-201ENST00000403538 BAZ1AQ9NRL2 1556 aaPredicted RBP15.77■□□□□ 0.11
TPT1P4-201ENST00000403538 CHADLQ6NUI6 762 aa15.68■□□□□ 0.1
TPT1P4-201ENST00000403538 PRR29P0C7W0 189 aa15.67■□□□□ 0.1
TPT1P4-201ENST00000403538 CECR2Q9BXF3 1484 aa15.65■□□□□ 0.1
TPT1P4-201ENST00000403538 MROH2BQ7Z745 1585 aa15.64■□□□□ 0.09
TPT1P4-201ENST00000403538 BICRAQ9NZM4 1560 aa15.62■□□□□ 0.09
TPT1P4-201ENST00000403538 PABPN1Q86U42 306 aaKnown RBP eCLIP15.59■□□□□ 0.09
TPT1P4-201ENST00000403538 SMARCA4P51532 1647 aa15.58■□□□□ 0.09
TPT1P4-201ENST00000403538 CLCN6P51797 869 aa15.58■□□□□ 0.08
TPT1P4-201ENST00000403538 PEG3Q9GZU2 1588 aa15.53■□□□□ 0.08
TPT1P4-201ENST00000403538 POTEIP0CG38 1075 aa15.52■□□□□ 0.08
TPT1P4-201ENST00000403538 CD44P16070 742 aaKnown RBP15.5■□□□□ 0.07
TPT1P4-201ENST00000403538 WIZO95785 1651 aa15.49■□□□□ 0.07
TPT1P4-201ENST00000403538 FARP1Q9Y4F1 1045 aaPredicted RBP15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 154.6 ms