Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 VWA5A-204ENST00000449321 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
SNX18Q96RF0 AL022069.2-201ENST00000623222 1785 ntBASIC8.54□□□□□ -1.04
SNX18Q96RF0 LINC01838-201ENST00000595783 1657 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
SNX18Q96RF0 ZNF709-201ENST00000397732 4910 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
SNX18Q96RF0 AC012085.2-201ENST00000550287 1587 ntTSL 2 BASIC8.54□□□□□ -1.04
SNX18Q96RF0 SLC33A1-202ENST00000392845 9217 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
SNX18Q96RF0 TTTY11-201ENST00000253470 837 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
SNX18Q96RF0 SPANXC-201ENST00000358993 387 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
SNX18Q96RF0 UBB-202ENST00000395837 1014 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
SNX18Q96RF0 PRYP1-201ENST00000412474 445 ntBASIC8.54□□□□□ -1.04
SNX18Q96RF0 CRYZL1-206ENST00000413017 627 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
SNX18Q96RF0 PRYP2-201ENST00000416652 492 ntBASIC8.54□□□□□ -1.04
SNX18Q96RF0 TPI1P1-201ENST00000420977 750 ntBASIC8.54□□□□□ -1.04
SNX18Q96RF0 AL021707.4-201ENST00000423346 410 ntTSL 5 BASIC8.54□□□□□ -1.04
SNX18Q96RF0 AL022324.1-201ENST00000433457 663 ntBASIC8.54□□□□□ -1.04
SNX18Q96RF0 AC012558.1-201ENST00000451946 622 ntTSL 3 BASIC8.54□□□□□ -1.04
SNX18Q96RF0 CSH1-203ENST00000453363 632 ntTSL 5 BASIC8.54□□□□□ -1.04
SNX18Q96RF0 AL662791.2-201ENST00000455287 596 ntBASIC8.54□□□□□ -1.04
SNX18Q96RF0 RN7SL167P-201ENST00000498381 302 ntBASIC8.54□□□□□ -1.04
SNX18Q96RF0 AC034207.1-201ENST00000506742 948 ntBASIC8.54□□□□□ -1.04
SNX18Q96RF0 AC008525.1-201ENST00000508719 676 ntTSL 3 BASIC8.54□□□□□ -1.04
SNX18Q96RF0 RNU4ATAC12P-201ENST00000516460 113 ntBASIC8.54□□□□□ -1.04
SNX18Q96RF0 RNA5SP459-201ENST00000516628 100 ntBASIC8.54□□□□□ -1.04
SNX18Q96RF0 TIMM8B-204ENST00000541231 805 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
SNX18Q96RF0 RRN3P1-203ENST00000551681 1151 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
SNX18Q96RF0 AL359792.1-201ENST00000554046 385 ntTSL 3 BASIC8.54□□□□□ -1.04
SNX18Q96RF0 AC025627.1-201ENST00000574267 730 ntTSL 5 BASIC8.54□□□□□ -1.04
SNX18Q96RF0 H3F3B-204ENST00000586607 551 ntAPPRIS P1 TSL 4 BASIC8.54□□□□□ -1.04
SNX18Q96RF0 AC020905.1-201ENST00000587777 575 ntTSL 4 BASIC8.54□□□□□ -1.04
SNX18Q96RF0 AP001542.1-201ENST00000591314 200 ntBASIC8.54□□□□□ -1.04
SNX18Q96RF0 FLT3LG-203ENST00000594009 1076 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
SNX18Q96RF0 AC244093.2-201ENST00000620102 524 ntBASIC8.54□□□□□ -1.04
SNX18Q96RF0 CU633904.2-201ENST00000624595 879 ntBASIC8.54□□□□□ -1.04
SNX18Q96RF0 YIPF5-201ENST00000274496 3147 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
SNX18Q96RF0 AL359924.1-201ENST00000450451 3127 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
SNX18Q96RF0 PNMA8C-201ENST00000617053 4255 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
SNX18Q96RF0 HMGB4-204ENST00000522796 2505 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
SNX18Q96RF0 TLK2P2-201ENST00000414066 2240 ntBASIC8.54□□□□□ -1.04
SNX18Q96RF0 C15orf53-201ENST00000318792 2043 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
SNX18Q96RF0 MPV17-202ENST00000357186 2011 ntTSL 2 BASIC8.54□□□□□ -1.04
SNX18Q96RF0 ZNF608-203ENST00000504926 4726 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
SNX18Q96RF0 MSH4-201ENST00000263187 3266 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
SNX18Q96RF0 EP400-204ENST00000389561 12317 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
SNX18Q96RF0 MS4A6A-203ENST00000426738 1736 ntTSL 5 BASIC8.54□□□□□ -1.04
SNX18Q96RF0 MEIS1-216ENST00000560281 2773 ntTSL 5 BASIC8.54□□□□□ -1.04
SNX18Q96RF0 ZSCAN9-201ENST00000252207 1621 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
SNX18Q96RF0 CFAP161-201ENST00000286732 1631 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
SNX18Q96RF0 PHLDB2-207ENST00000477695 5813 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
SNX18Q96RF0 NCAM1-228ENST00000621128 4698 ntTSL 5 BASIC8.54□□□□□ -1.04
SNX18Q96RF0 ELOVL2-201ENST00000354666 3997 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
SNX18Q96RF0 PABPC1P12-201ENST00000428454 2175 ntBASIC8.54□□□□□ -1.04
SNX18Q96RF0 RXFP1-207ENST00000470033 2175 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
SNX18Q96RF0 GRIA2-211ENST00000507898 3041 ntTSL 2 BASIC8.54□□□□□ -1.04
SNX18Q96RF0 ADCY10P1-202ENST00000457653 3785 ntBASIC8.53□□□□□ -1.04
SNX18Q96RF0 LRRTM2-202ENST00000518785 1958 ntTSL 2 BASIC8.53□□□□□ -1.04
SNX18Q96RF0 USP13-203ENST00000496897 2747 ntTSL 2 BASIC8.53□□□□□ -1.04
SNX18Q96RF0 VANGL1-204ENST00000369510 8647 ntAPPRIS ALT1 TSL 1 (best) BASIC8.53□□□□□ -1.04
SNX18Q96RF0 AC079061.1-201ENST00000499579 3075 ntTSL 2 BASIC8.53□□□□□ -1.04
SNX18Q96RF0 UBN2-201ENST00000473989 14444 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
SNX18Q96RF0 HNRNPC-223ENST00000556142 1599 ntTSL 5 BASIC8.53□□□□□ -1.04
SNX18Q96RF0 ERMAP-203ENST00000372517 3423 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
SNX18Q96RF0 SKA2-201ENST00000330137 2798 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
SNX18Q96RF0 TEFM-204ENST00000580840 2109 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
SNX18Q96RF0 ZNF507-201ENST00000311921 7638 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
SNX18Q96RF0 AC133485.2-201ENST00000566232 2484 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
SNX18Q96RF0 AC008764.10-201ENST00000625135 1830 ntBASIC8.53□□□□□ -1.04
SNX18Q96RF0 UGT1A1-202ENST00000360418 3389 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
SNX18Q96RF0 NDUFS4-201ENST00000296684 675 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
SNX18Q96RF0 GH2-201ENST00000332800 1138 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
SNX18Q96RF0 IL19-202ENST00000340758 1032 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
SNX18Q96RF0 RNU6-673P-201ENST00000365084 104 ntBASIC8.53□□□□□ -1.04
SNX18Q96RF0 KRTAP9-3-201ENST00000411528 992 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
SNX18Q96RF0 SAA2-202ENST00000414546 1022 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
SNX18Q96RF0 RPL17P10-201ENST00000416091 555 ntBASIC8.53□□□□□ -1.04
SNX18Q96RF0 AC015977.2-201ENST00000420852 567 ntTSL 3 BASIC8.53□□□□□ -1.04
SNX18Q96RF0 AC092042.3-203ENST00000443313 950 ntTSL 2 BASIC8.53□□□□□ -1.04
SNX18Q96RF0 AC090680.1-201ENST00000464696 860 ntBASIC8.53□□□□□ -1.04
SNX18Q96RF0 RPSAP34-201ENST00000476193 736 ntBASIC8.53□□□□□ -1.04
SNX18Q96RF0 SNRPCP16-201ENST00000506029 210 ntBASIC8.53□□□□□ -1.04
SNX18Q96RF0 MRPS18C-205ENST00000507349 350 ntTSL 3 BASIC8.53□□□□□ -1.04
SNX18Q96RF0 RPPH1-3P-201ENST00000516541 322 ntBASIC8.53□□□□□ -1.04
SNX18Q96RF0 AC008066.1-201ENST00000520373 863 ntBASIC8.53□□□□□ -1.04
SNX18Q96RF0 AP002512.1-201ENST00000525853 653 ntBASIC8.53□□□□□ -1.04
SNX18Q96RF0 SAA1-203ENST00000532858 583 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
SNX18Q96RF0 AL162311.2-201ENST00000550416 709 ntBASIC8.53□□□□□ -1.04
SNX18Q96RF0 USP2-AS1-204ENST00000577297 689 ntTSL 3 BASIC8.53□□□□□ -1.04
SNX18Q96RF0 HINT1P2-201ENST00000604731 235 ntBASIC8.53□□□□□ -1.04
SNX18Q96RF0 AC069503.1-202ENST00000616576 642 ntBASIC8.53□□□□□ -1.04
SNX18Q96RF0 CDK10-221ENST00000617879 819 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
SNX18Q96RF0 STRADA-224ENST00000617949 705 ntTSL 2 BASIC8.53□□□□□ -1.04
SNX18Q96RF0 HIST1H4L-201ENST00000618305 312 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
SNX18Q96RF0 WT1-AS_1.1-201ENST00000619639 109 ntBASIC8.53□□□□□ -1.04
SNX18Q96RF0 AC000041.2-201ENST00000619824 151 ntBASIC8.53□□□□□ -1.04
SNX18Q96RF0 Metazoa_SRP.205-201ENST00000620071 267 ntBASIC8.53□□□□□ -1.04
SNX18Q96RF0 ZBBX-203ENST00000392766 3250 ntAPPRIS P3 TSL 2 BASIC8.53□□□□□ -1.04
SNX18Q96RF0 MPI-201ENST00000323744 1619 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
SNX18Q96RF0 AC009053.1-202ENST00000563377 2051 ntBASIC8.53□□□□□ -1.04
SNX18Q96RF0 CPM-211ENST00000551568 6655 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
SNX18Q96RF0 CLDN2-201ENST00000336803 2959 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
SNX18Q96RF0 ARHGAP19-203ENST00000371027 2301 ntTSL 2 BASIC8.53□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms