RNA–Protein interactions for RNA: ENST00000551568.5

CPM-211, Transcript of carboxypeptidase M, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPM, Length 6,655 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPM-211ENST00000551568 DCAF8L2P0C7V8 631 aa15.71■□□□□ 0.1
CPM-211ENST00000551568 NISCHQ9Y2I1 1504 aa15.42■□□□□ 0.06
CPM-211ENST00000551568 SUPT5HO00267 1087 aaKnown RBP15□□□□□ -0.01
CPM-211ENST00000551568 SHROOM4Q9ULL8 1493 aa14.86□□□□□ -0.03
CPM-211ENST00000551568 EHMT2Q96KQ7 1210 aa14.52□□□□□ -0.09
CPM-211ENST00000551568 PELP1Q8IZL8 1130 aaKnown RBP14.37□□□□□ -0.11
CPM-211ENST00000551568 APLP2Q06481 763 aa14.33□□□□□ -0.12
CPM-211ENST00000551568 FAM9AQ8IZU1 332 aaPredicted RBP14.13□□□□□ -0.15
CPM-211ENST00000551568 TTBK1Q5TCY1 1321 aaPredicted RBP14.06□□□□□ -0.16
CPM-211ENST00000551568 PCGF6Q9BYE7 350 aa14.05□□□□□ -0.16
CPM-211ENST00000551568 ZEB1P37275 1124 aaPredicted RBP13.97□□□□□ -0.17
CPM-211ENST00000551568 TRIM41Q8WV44 630 aa13.96□□□□□ -0.18
CPM-211ENST00000551568 RANGAP1P46060 587 aaPredicted RBP13.9□□□□□ -0.18
CPM-211ENST00000551568 CENPBP07199 599 aaPredicted RBP13.87□□□□□ -0.19
CPM-211ENST00000551568 CCER1Q8TC90 406 aaPredicted RBP13.86□□□□□ -0.19
CPM-211ENST00000551568 ATP1B4Q9UN42 357 aaPredicted RBP13.81□□□□□ -0.2
CPM-211ENST00000551568 ERICH6Q7L0X2 663 aa13.79□□□□□ -0.2
CPM-211ENST00000551568 UBTFP17480 764 aaKnown RBP13.77□□□□□ -0.21
CPM-211ENST00000551568 NEFLP07196 543 aa13.58□□□□□ -0.24
CPM-211ENST00000551568 TRIM26Q12899 539 aaPredicted RBP13.56□□□□□ -0.24
CPM-211ENST00000551568 YTHDC1Q96MU7 727 aaKnown RBP13.56□□□□□ -0.24
CPM-211ENST00000551568 PPARGC1BQ86YN6 1023 aaKnown RBP13.52□□□□□ -0.24
CPM-211ENST00000551568 MYT1Q01538 1121 aa13.39□□□□□ -0.27
CPM-211ENST00000551568 HRCP23327 699 aa13.37□□□□□ -0.27
CPM-211ENST00000551568 ITGAEP38570 1179 aa13.32□□□□□ -0.28
CPM-211ENST00000551568 CHIC1Q5VXU3 224 aa13.31□□□□□ -0.28
CPM-211ENST00000551568 LOC105371045A0A1W2PR82 267 aa13.31□□□□□ -0.28
CPM-211ENST00000551568 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.28□□□□□ -0.28
CPM-211ENST00000551568 HNRNPUL2Q1KMD3 747 aaKnown RBP13.28□□□□□ -0.28
CPM-211ENST00000551568 MYT1LQ9UL68 1186 aa13.26□□□□□ -0.29
CPM-211ENST00000551568 POLR3GLQ9BT43 218 aa13.24□□□□□ -0.29
CPM-211ENST00000551568 DAXXQ9UER7 740 aaPredicted RBP13.18□□□□□ -0.3
CPM-211ENST00000551568 ABCC9O60706 1549 aa13.15□□□□□ -0.3
CPM-211ENST00000551568 FAM50AQ14320 339 aaKnown RBP13.07□□□□□ -0.32
CPM-211ENST00000551568 DIEXFQ68CQ4 756 aaKnown RBP13.05□□□□□ -0.32
CPM-211ENST00000551568 CNGB1Q14028 1251 aaPredicted RBP13.03□□□□□ -0.32
CPM-211ENST00000551568 PABPN1Q86U42 306 aaKnown RBP eCLIP13.02□□□□□ -0.33
CPM-211ENST00000551568 SLC4A1APQ9BWU0 796 aaKnown RBP13.01□□□□□ -0.33
CPM-211ENST00000551568 TRIM52Q96A61 297 aa12.98□□□□□ -0.33
CPM-211ENST00000551568 SCRIBQ14160 1630 aa12.94□□□□□ -0.34
CPM-211ENST00000551568 NEUROD1Q13562 356 aa12.93□□□□□ -0.34
CPM-211ENST00000551568 ZNF316A6NFI3 1004 aaPredicted RBP12.93□□□□□ -0.34
CPM-211ENST00000551568 CCDC180Q9P1Z9 1646 aa12.87□□□□□ -0.35
CPM-211ENST00000551568 RTL5Q5HYW3 569 aaPredicted RBP12.86□□□□□ -0.35
CPM-211ENST00000551568 CLSPNQ9HAW4 1339 aa12.86□□□□□ -0.35
CPM-211ENST00000551568 ANP32CO43423 234 aa12.85□□□□□ -0.35
CPM-211ENST00000551568 ZCCHC6Q5VYS8 1495 aaKnown RBP12.81□□□□□ -0.36
CPM-211ENST00000551568 ZNF326Q5BKZ1 582 aaKnown RBP12.77□□□□□ -0.37
CPM-211ENST00000551568 BCANQ96GW7 911 aa12.75□□□□□ -0.37
CPM-211ENST00000551568 GTF3C3Q9Y5Q9 886 aa12.75□□□□□ -0.37
CPM-211ENST00000551568 CDK11AQ9UQ88 783 aaPredicted RBP12.73□□□□□ -0.37
CPM-211ENST00000551568 FBLN2P98095 1184 aa12.73□□□□□ -0.37
CPM-211ENST00000551568 DCAF1Q9Y4B6 1507 aa12.7□□□□□ -0.38
CPM-211ENST00000551568 CSRNP3Q8WYN3 585 aa12.69□□□□□ -0.38
CPM-211ENST00000551568 P3H3Q8IVL6 736 aa12.69□□□□□ -0.38
CPM-211ENST00000551568 ZBTB47Q9UFB7 747 aaPredicted RBP12.66□□□□□ -0.38
CPM-211ENST00000551568 CANXP27824 592 aaKnown RBP12.65□□□□□ -0.38
CPM-211ENST00000551568 ARID3CA6NKF2 412 aa12.62□□□□□ -0.39
CPM-211ENST00000551568 ACIN1Q9UKV3 1341 aaKnown RBP12.6□□□□□ -0.39
CPM-211ENST00000551568 ZNF777Q9ULD5 760 aaPredicted RBP12.59□□□□□ -0.39
CPM-211ENST00000551568 NEFMP07197 916 aa12.57□□□□□ -0.4
CPM-211ENST00000551568 TONSLQ96HA7 1378 aa12.54□□□□□ -0.4
CPM-211ENST00000551568 RB1CC1Q8TDY2 1594 aa12.54□□□□□ -0.4
CPM-211ENST00000551568 SLC24A1O60721 1099 aa12.53□□□□□ -0.4
CPM-211ENST00000551568 ANP32AP39687 249 aaKnown RBP12.52□□□□□ -0.41
CPM-211ENST00000551568 BCL11AQ9H165 835 aa12.45□□□□□ -0.42
CPM-211ENST00000551568 FKBP8Q14318 412 aa12.43□□□□□ -0.42
CPM-211ENST00000551568 NPM2Q86SE8 214 aaKnown RBP12.43□□□□□ -0.42
CPM-211ENST00000551568 GOLGA3Q08378 1498 aa12.4□□□□□ -0.42
CPM-211ENST00000551568 NACADO15069 1562 aa12.39□□□□□ -0.43
CPM-211ENST00000551568 ESF1Q9H501 851 aaKnown RBP12.38□□□□□ -0.43
CPM-211ENST00000551568 CHGAP10645 457 aaKnown RBP12.38□□□□□ -0.43
CPM-211ENST00000551568 HNRNPUQ00839 825 aaKnown RBP eCLIP12.37□□□□□ -0.43
CPM-211ENST00000551568 MYO15BQ96JP2 1530 aa12.37□□□□□ -0.43
CPM-211ENST00000551568 CLIP1P30622 1438 aa12.37□□□□□ -0.43
CPM-211ENST00000551568 STAG3Q9UJ98 1225 aa12.37□□□□□ -0.43
CPM-211ENST00000551568 DDX10Q13206 875 aaKnown RBP12.37□□□□□ -0.43
CPM-211ENST00000551568 FAM9BQ8IZU0 186 aa12.37□□□□□ -0.43
CPM-211ENST00000551568 CHIC2Q9UKJ5 165 aa12.35□□□□□ -0.43
CPM-211ENST00000551568 MTUS2Q5JR59 1369 aa12.34□□□□□ -0.43
CPM-211ENST00000551568 EEA1Q15075 1411 aa12.34□□□□□ -0.43
CPM-211ENST00000551568 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.32□□□□□ -0.44
CPM-211ENST00000551568 NPM1P06748 294 aaKnown RBP eCLIP12.31□□□□□ -0.44
CPM-211ENST00000551568 UPF2Q9HAU5 1272 aaKnown RBP12.31□□□□□ -0.44
CPM-211ENST00000551568 CEP162Q5TB80 1403 aa12.31□□□□□ -0.44
CPM-211ENST00000551568 RSF1Q96T23 1441 aaPredicted RBP12.3□□□□□ -0.44
CPM-211ENST00000551568 BAZ1BQ9UIG0 1483 aaKnown RBP12.29□□□□□ -0.44
CPM-211ENST00000551568 WDR43Q15061 677 aaKnown RBP eCLIP12.29□□□□□ -0.44
CPM-211ENST00000551568 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.29□□□□□ -0.44
CPM-211ENST00000551568 TMC1Q8TDI8 760 aa12.28□□□□□ -0.44
CPM-211ENST00000551568 ANP32BQ92688 251 aaKnown RBP12.28□□□□□ -0.44
CPM-211ENST00000551568 HSP90AA1P07900 732 aaKnown RBP12.27□□□□□ -0.45
CPM-211ENST00000551568 SALL2Q9Y467 1007 aaPredicted RBP12.25□□□□□ -0.45
CPM-211ENST00000551568 KDM2AQ9Y2K7 1162 aa12.24□□□□□ -0.45
CPM-211ENST00000551568 TSPY4P0CV99 314 aa12.24□□□□□ -0.45
CPM-211ENST00000551568 TSPY10P0CW01 314 aa12.24□□□□□ -0.45
CPM-211ENST00000551568 CHMP7Q8WUX9 453 aaPredicted RBP12.24□□□□□ -0.45
CPM-211ENST00000551568 CEP164Q9UPV0 1460 aa12.24□□□□□ -0.45
CPM-211ENST00000551568 CCDC136Q96JN2 1154 aa12.24□□□□□ -0.45
CPM-211ENST00000551568 WRNQ14191 1432 aaPredicted RBP eCLIP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms