RNA–Protein interactions for RNA: ENST00000518785.1

LRRTM2-202, Transcript of leucine rich repeat transmembrane neuronal 2, humanhuman

TSL 2 BASIC

Gene LRRTM2, Length 1,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM2-202ENST00000518785 AEBP2Q6ZN18 517 aaPredicted RBP22.49■■□□□ 1.19
LRRTM2-202ENST00000518785 CHIC1Q5VXU3 224 aa21.44■■□□□ 1.02
LRRTM2-202ENST00000518785 NISCHQ9Y2I1 1504 aa20.88■□□□□ 0.93
LRRTM2-202ENST00000518785 SENP3Q9H4L4 574 aaPredicted RBP19.21■□□□□ 0.67
LRRTM2-202ENST00000518785 PHF23Q9BUL5 403 aaPredicted RBP18.95■□□□□ 0.62
LRRTM2-202ENST00000518785 CCDC180Q9P1Z9 1646 aa18.16■□□□□ 0.5
LRRTM2-202ENST00000518785 FOXD1Q16676 465 aa17.87■□□□□ 0.45
LRRTM2-202ENST00000518785 ZCCHC6Q5VYS8 1495 aaKnown RBP17.57■□□□□ 0.4
LRRTM2-202ENST00000518785 DCAF1Q9Y4B6 1507 aa17.27■□□□□ 0.35
LRRTM2-202ENST00000518785 DCAF8L2P0C7V8 631 aa17.19■□□□□ 0.34
LRRTM2-202ENST00000518785 SHROOM4Q9ULL8 1493 aa17.18■□□□□ 0.34
LRRTM2-202ENST00000518785 PLPPR3Q6T4P5 718 aa17.17■□□□□ 0.34
LRRTM2-202ENST00000518785 MYO15BQ96JP2 1530 aa16.98■□□□□ 0.31
LRRTM2-202ENST00000518785 ABCC9O60706 1549 aa16.94■□□□□ 0.3
LRRTM2-202ENST00000518785 NACADO15069 1562 aa16.84■□□□□ 0.29
LRRTM2-202ENST00000518785 PPP6R1Q9UPN7 881 aa16.75■□□□□ 0.27
LRRTM2-202ENST00000518785 MSH5O43196 834 aa16.73■□□□□ 0.27
LRRTM2-202ENST00000518785 SCRIBQ14160 1630 aa16.72■□□□□ 0.27
LRRTM2-202ENST00000518785 PIAS4Q8N2W9 510 aaPredicted RBP16.71■□□□□ 0.27
LRRTM2-202ENST00000518785 ADRA2BP18089 450 aa16.69■□□□□ 0.26
LRRTM2-202ENST00000518785 RB1CC1Q8TDY2 1594 aa16.66■□□□□ 0.26
LRRTM2-202ENST00000518785 SUPT5HO00267 1087 aaKnown RBP16.64■□□□□ 0.25
LRRTM2-202ENST00000518785 UNC13AQ9UPW8 1703 aa16.37■□□□□ 0.21
LRRTM2-202ENST00000518785 RSF1Q96T23 1441 aaPredicted RBP16.25■□□□□ 0.19
LRRTM2-202ENST00000518785 POTEDQ86YR6 584 aa16.2■□□□□ 0.18
LRRTM2-202ENST00000518785 CECR2Q9BXF3 1484 aa16.18■□□□□ 0.18
LRRTM2-202ENST00000518785 MROH2BQ7Z745 1585 aa16.13■□□□□ 0.17
LRRTM2-202ENST00000518785 BAZ1AQ9NRL2 1556 aaPredicted RBP16.13■□□□□ 0.17
LRRTM2-202ENST00000518785 BICRAQ9NZM4 1560 aa16.12■□□□□ 0.17
LRRTM2-202ENST00000518785 WIZO95785 1651 aa16.04■□□□□ 0.16
LRRTM2-202ENST00000518785 SMARCA4P51532 1647 aa16.03■□□□□ 0.16
LRRTM2-202ENST00000518785 PABPN1Q86U42 306 aaKnown RBP eCLIP16■□□□□ 0.15
LRRTM2-202ENST00000518785 TOP2AP11388 1531 aaKnown RBP15.87■□□□□ 0.13
LRRTM2-202ENST00000518785 PEG3Q9GZU2 1588 aa15.81■□□□□ 0.12
LRRTM2-202ENST00000518785 SMARCA2P51531 1590 aa15.73■□□□□ 0.11
LRRTM2-202ENST00000518785 CCDC88BA6NC98 1476 aa15.7■□□□□ 0.1
LRRTM2-202ENST00000518785 ATAD2BQ9ULI0 1458 aa15.68■□□□□ 0.1
LRRTM2-202ENST00000518785 EIF4G1Q04637 1599 aaKnown RBP15.67■□□□□ 0.1
LRRTM2-202ENST00000518785 TRIM41Q8WV44 630 aa15.64■□□□□ 0.09
LRRTM2-202ENST00000518785 BAZ1BQ9UIG0 1483 aaKnown RBP15.63■□□□□ 0.09
LRRTM2-202ENST00000518785 HMGXB3Q12766 1538 aa15.53■□□□□ 0.08
LRRTM2-202ENST00000518785 NCAPD3P42695 1498 aa15.5■□□□□ 0.07
LRRTM2-202ENST00000518785 ABCC8Q09428 1581 aa15.45■□□□□ 0.06
LRRTM2-202ENST00000518785 LOC105371045A0A1W2PR82 267 aa15.4■□□□□ 0.06
LRRTM2-202ENST00000518785 CC2D2AQ9P2K1 1620 aa15.36■□□□□ 0.05
LRRTM2-202ENST00000518785 FAM9AQ8IZU1 332 aaPredicted RBP15.35■□□□□ 0.05
LRRTM2-202ENST00000518785 SCAF1Q9H7N4 1312 aaKnown RBP15.33■□□□□ 0.04
LRRTM2-202ENST00000518785 WRNQ14191 1432 aaPredicted RBP eCLIP15.32■□□□□ 0.04
LRRTM2-202ENST00000518785 MAPK8IP2Q13387 824 aaPredicted RBP15.31■□□□□ 0.04
LRRTM2-202ENST00000518785 PRDM2Q13029 1718 aa15.27■□□□□ 0.03
LRRTM2-202ENST00000518785 SYNJ1O43426 1573 aa15.25■□□□□ 0.03
LRRTM2-202ENST00000518785 DMRT2Q9Y5R5 561 aa15.24■□□□□ 0.03
LRRTM2-202ENST00000518785 EEA1Q15075 1411 aa15.23■□□□□ 0.03
LRRTM2-202ENST00000518785 CFTRP13569 1480 aa15.22■□□□□ 0.03
LRRTM2-202ENST00000518785 TOP2BQ02880 1626 aa15.19■□□□□ 0.02
LRRTM2-202ENST00000518785 BIVM-ERCC5R4GMW8 1640 aa15.19■□□□□ 0.02
LRRTM2-202ENST00000518785 SOGA1O94964 1423 aa15.17■□□□□ 0.02
LRRTM2-202ENST00000518785 CADPSQ9ULU8 1353 aa15.13■□□□□ 0.01
LRRTM2-202ENST00000518785 EHMT2Q96KQ7 1210 aa15.13■□□□□ 0.01
LRRTM2-202ENST00000518785 RUSC2Q8N2Y8 1516 aa15.1■□□□□ 0.01
LRRTM2-202ENST00000518785 CSRNP3Q8WYN3 585 aa15.09■□□□□ 0.01
LRRTM2-202ENST00000518785 CUX1P39880 1505 aa15.07■□□□□ 0
LRRTM2-202ENST00000518785 PPP4R3CPQ6ZMV5 832 aa15.04■□□□□ -0
LRRTM2-202ENST00000518785 KIF21BO75037 1637 aa15.03■□□□□ -0
LRRTM2-202ENST00000518785 GOLGA3Q08378 1498 aa15.02■□□□□ -0
LRRTM2-202ENST00000518785 CEP164Q9UPV0 1460 aa15.01□□□□□ -0.01
LRRTM2-202ENST00000518785 TNIKQ9UKE5 1360 aa15□□□□□ -0.01
LRRTM2-202ENST00000518785 LAMC3Q9Y6N6 1575 aa14.99□□□□□ -0.01
LRRTM2-202ENST00000518785 FANCD2Q9BXW9 1451 aa14.98□□□□□ -0.01
LRRTM2-202ENST00000518785 UBTFP17480 764 aaKnown RBP14.94□□□□□ -0.02
LRRTM2-202ENST00000518785 PCGF6Q9BYE7 350 aa14.94□□□□□ -0.02
LRRTM2-202ENST00000518785 CEP162Q5TB80 1403 aa14.94□□□□□ -0.02
LRRTM2-202ENST00000518785 NESP48681 1621 aa14.93□□□□□ -0.02
LRRTM2-202ENST00000518785 KIF27Q86VH2 1401 aa14.92□□□□□ -0.02
LRRTM2-202ENST00000518785 TRIM26Q12899 539 aaPredicted RBP14.91□□□□□ -0.02
LRRTM2-202ENST00000518785 DNMBPQ6XZF7 1577 aa14.9□□□□□ -0.02
LRRTM2-202ENST00000518785 FGD5Q6ZNL6 1462 aa14.88□□□□□ -0.03
LRRTM2-202ENST00000518785 ERICH3Q5RHP9 1530 aa14.88□□□□□ -0.03
LRRTM2-202ENST00000518785 RAPGEF2Q9Y4G8 1499 aa14.87□□□□□ -0.03
LRRTM2-202ENST00000518785 PDS5BQ9NTI5 1447 aa14.85□□□□□ -0.03
LRRTM2-202ENST00000518785 PRXQ9BXM0 1461 aa14.84□□□□□ -0.03
LRRTM2-202ENST00000518785 TOPBP1Q92547 1522 aa14.84□□□□□ -0.03
LRRTM2-202ENST00000518785 CUX2O14529 1486 aa14.83□□□□□ -0.03
LRRTM2-202ENST00000518785 KIF21AQ7Z4S6 1674 aa14.82□□□□□ -0.04
LRRTM2-202ENST00000518785 DNAJC5BQ9UF47 199 aa14.82□□□□□ -0.04
LRRTM2-202ENST00000518785 CLIP1P30622 1438 aa14.78□□□□□ -0.04
LRRTM2-202ENST00000518785 POLA1P09884 1462 aaPredicted RBP14.78□□□□□ -0.04
LRRTM2-202ENST00000518785 URB2Q14146 1524 aaKnown RBP14.77□□□□□ -0.05
LRRTM2-202ENST00000518785 CNKSR2Q8WXI2 1034 aa14.76□□□□□ -0.05
LRRTM2-202ENST00000518785 ABCA10Q8WWZ4 1543 aa14.76□□□□□ -0.05
LRRTM2-202ENST00000518785 IGF1RP08069 1367 aa14.73□□□□□ -0.05
LRRTM2-202ENST00000518785 WDR97A6NE52 1622 aa14.72□□□□□ -0.05
LRRTM2-202ENST00000518785 RAD54L2Q9Y4B4 1467 aa14.72□□□□□ -0.05
LRRTM2-202ENST00000518785 HOXD11P31277 338 aaPredicted RBP14.71□□□□□ -0.05
LRRTM2-202ENST00000518785 HRCP23327 699 aa14.68□□□□□ -0.06
LRRTM2-202ENST00000518785 PPARGC1BQ86YN6 1023 aaKnown RBP14.68□□□□□ -0.06
LRRTM2-202ENST00000518785 CUL7Q14999 1698 aa14.68□□□□□ -0.06
LRRTM2-202ENST00000518785 CARMIL1Q5VZK9 1371 aa14.68□□□□□ -0.06
LRRTM2-202ENST00000518785 VPS8Q8N3P4 1428 aa14.68□□□□□ -0.06
LRRTM2-202ENST00000518785 MRC2Q9UBG0 1479 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms