RNA–Protein interactions for RNA: ENST00000621128.4

NCAM1-228, Transcript of neural cell adhesion molecule 1, humanhuman

TSL 5 BASIC

Gene NCAM1, Length 4,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAM1-228ENST00000621128 NISCHQ9Y2I1 1504 aa17.23■□□□□ 0.35
NCAM1-228ENST00000621128 DCAF8L2P0C7V8 631 aa16.12■□□□□ 0.17
NCAM1-228ENST00000621128 SUPT5HO00267 1087 aaKnown RBP15.6■□□□□ 0.09
NCAM1-228ENST00000621128 SHROOM4Q9ULL8 1493 aa15.53■□□□□ 0.08
NCAM1-228ENST00000621128 TRIM41Q8WV44 630 aa14.6□□□□□ -0.07
NCAM1-228ENST00000621128 EHMT2Q96KQ7 1210 aa14.57□□□□□ -0.08
NCAM1-228ENST00000621128 FAM9AQ8IZU1 332 aaPredicted RBP14.55□□□□□ -0.08
NCAM1-228ENST00000621128 PCGF6Q9BYE7 350 aa14.48□□□□□ -0.09
NCAM1-228ENST00000621128 APLP2Q06481 763 aa14.45□□□□□ -0.1
NCAM1-228ENST00000621128 CHIC1Q5VXU3 224 aa14.44□□□□□ -0.1
NCAM1-228ENST00000621128 CCDC180Q9P1Z9 1646 aa14.4□□□□□ -0.1
NCAM1-228ENST00000621128 ZCCHC6Q5VYS8 1495 aaKnown RBP14.39□□□□□ -0.11
NCAM1-228ENST00000621128 ZEB1P37275 1124 aaPredicted RBP14.35□□□□□ -0.11
NCAM1-228ENST00000621128 ABCC9O60706 1549 aa14.25□□□□□ -0.13
NCAM1-228ENST00000621128 UBTFP17480 764 aaKnown RBP14.2□□□□□ -0.14
NCAM1-228ENST00000621128 TRIM26Q12899 539 aaPredicted RBP14.18□□□□□ -0.14
NCAM1-228ENST00000621128 LOC105371045A0A1W2PR82 267 aa14.11□□□□□ -0.15
NCAM1-228ENST00000621128 TTBK1Q5TCY1 1321 aaPredicted RBP14.1□□□□□ -0.15
NCAM1-228ENST00000621128 CCER1Q8TC90 406 aaPredicted RBP14.09□□□□□ -0.15
NCAM1-228ENST00000621128 HRCP23327 699 aa14.07□□□□□ -0.16
NCAM1-228ENST00000621128 RANGAP1P46060 587 aaPredicted RBP14.01□□□□□ -0.17
NCAM1-228ENST00000621128 PELP1Q8IZL8 1130 aaKnown RBP13.93□□□□□ -0.18
NCAM1-228ENST00000621128 DCAF1Q9Y4B6 1507 aa13.92□□□□□ -0.18
NCAM1-228ENST00000621128 SCRIBQ14160 1630 aa13.92□□□□□ -0.18
NCAM1-228ENST00000621128 PABPN1Q86U42 306 aaKnown RBP eCLIP13.9□□□□□ -0.18
NCAM1-228ENST00000621128 CENPBP07199 599 aaPredicted RBP13.88□□□□□ -0.19
NCAM1-228ENST00000621128 PPARGC1BQ86YN6 1023 aaKnown RBP13.87□□□□□ -0.19
NCAM1-228ENST00000621128 ATP1B4Q9UN42 357 aaPredicted RBP13.84□□□□□ -0.19
NCAM1-228ENST00000621128 NACADO15069 1562 aa13.77□□□□□ -0.21
NCAM1-228ENST00000621128 RB1CC1Q8TDY2 1594 aa13.72□□□□□ -0.21
NCAM1-228ENST00000621128 RSF1Q96T23 1441 aaPredicted RBP13.7□□□□□ -0.22
NCAM1-228ENST00000621128 CSRNP3Q8WYN3 585 aa13.67□□□□□ -0.22
NCAM1-228ENST00000621128 HNRNPUL2Q1KMD3 747 aaKnown RBP13.63□□□□□ -0.23
NCAM1-228ENST00000621128 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.57□□□□□ -0.24
NCAM1-228ENST00000621128 MYO15BQ96JP2 1530 aa13.56□□□□□ -0.24
NCAM1-228ENST00000621128 ITGAEP38570 1179 aa13.53□□□□□ -0.24
NCAM1-228ENST00000621128 BAZ1AQ9NRL2 1556 aaPredicted RBP13.47□□□□□ -0.25
NCAM1-228ENST00000621128 EEA1Q15075 1411 aa13.46□□□□□ -0.26
NCAM1-228ENST00000621128 YTHDC1Q96MU7 727 aaKnown RBP13.45□□□□□ -0.26
NCAM1-228ENST00000621128 DIEXFQ68CQ4 756 aaKnown RBP13.43□□□□□ -0.26
NCAM1-228ENST00000621128 NEFLP07196 543 aa13.4□□□□□ -0.26
NCAM1-228ENST00000621128 CECR2Q9BXF3 1484 aa13.39□□□□□ -0.27
NCAM1-228ENST00000621128 FAM50AQ14320 339 aaKnown RBP13.36□□□□□ -0.27
NCAM1-228ENST00000621128 WRNQ14191 1432 aaPredicted RBP eCLIP13.31□□□□□ -0.28
NCAM1-228ENST00000621128 BAZ1BQ9UIG0 1483 aaKnown RBP13.31□□□□□ -0.28
NCAM1-228ENST00000621128 MROH2BQ7Z745 1585 aa13.29□□□□□ -0.28
NCAM1-228ENST00000621128 ZNF316A6NFI3 1004 aaPredicted RBP13.29□□□□□ -0.28
NCAM1-228ENST00000621128 GOLGA3Q08378 1498 aa13.28□□□□□ -0.28
NCAM1-228ENST00000621128 TNIKQ9UKE5 1360 aa13.25□□□□□ -0.29
NCAM1-228ENST00000621128 CLIP1P30622 1438 aa13.25□□□□□ -0.29
NCAM1-228ENST00000621128 CEP162Q5TB80 1403 aa13.24□□□□□ -0.29
NCAM1-228ENST00000621128 CEP164Q9UPV0 1460 aa13.2□□□□□ -0.3
NCAM1-228ENST00000621128 P3H3Q8IVL6 736 aa13.19□□□□□ -0.3
NCAM1-228ENST00000621128 TRIM52Q96A61 297 aa13.18□□□□□ -0.3
NCAM1-228ENST00000621128 NEUROD1Q13562 356 aa13.16□□□□□ -0.3
NCAM1-228ENST00000621128 ERICH6Q7L0X2 663 aa13.16□□□□□ -0.3
NCAM1-228ENST00000621128 CCDC88BA6NC98 1476 aa13.16□□□□□ -0.3
NCAM1-228ENST00000621128 KIF27Q86VH2 1401 aa13.14□□□□□ -0.31
NCAM1-228ENST00000621128 TOP2AP11388 1531 aaKnown RBP13.14□□□□□ -0.31
NCAM1-228ENST00000621128 MYT1Q01538 1121 aa13.12□□□□□ -0.31
NCAM1-228ENST00000621128 CDK11AQ9UQ88 783 aaPredicted RBP13.12□□□□□ -0.31
NCAM1-228ENST00000621128 SMARCA2P51531 1590 aa13.12□□□□□ -0.31
NCAM1-228ENST00000621128 MYT1LQ9UL68 1186 aa13.11□□□□□ -0.31
NCAM1-228ENST00000621128 POLR3GLQ9BT43 218 aa13.09□□□□□ -0.31
NCAM1-228ENST00000621128 WIZO95785 1651 aa13.09□□□□□ -0.31
NCAM1-228ENST00000621128 FBLN2P98095 1184 aa13.07□□□□□ -0.32
NCAM1-228ENST00000621128 ANP32CO43423 234 aa13.06□□□□□ -0.32
NCAM1-228ENST00000621128 SOGA1O94964 1423 aa13.06□□□□□ -0.32
NCAM1-228ENST00000621128 ACIN1Q9UKV3 1341 aaKnown RBP13.04□□□□□ -0.32
NCAM1-228ENST00000621128 SMARCA4P51532 1647 aa13.02□□□□□ -0.32
NCAM1-228ENST00000621128 GTF3C3Q9Y5Q9 886 aa13.01□□□□□ -0.33
NCAM1-228ENST00000621128 ABCC8Q09428 1581 aa13□□□□□ -0.33
NCAM1-228ENST00000621128 MTUS2Q5JR59 1369 aa12.99□□□□□ -0.33
NCAM1-228ENST00000621128 TONSLQ96HA7 1378 aa12.97□□□□□ -0.33
NCAM1-228ENST00000621128 ATAD2BQ9ULI0 1458 aa12.95□□□□□ -0.34
NCAM1-228ENST00000621128 CLSPNQ9HAW4 1339 aa12.95□□□□□ -0.34
NCAM1-228ENST00000621128 VPS8Q8N3P4 1428 aa12.94□□□□□ -0.34
NCAM1-228ENST00000621128 ARID3CA6NKF2 412 aa12.94□□□□□ -0.34
NCAM1-228ENST00000621128 CARMIL1Q5VZK9 1371 aa12.9□□□□□ -0.34
NCAM1-228ENST00000621128 FHAD1B1AJZ9 1412 aa12.9□□□□□ -0.34
NCAM1-228ENST00000621128 CUX2O14529 1486 aa12.9□□□□□ -0.34
NCAM1-228ENST00000621128 ZNF777Q9ULD5 760 aaPredicted RBP12.89□□□□□ -0.35
NCAM1-228ENST00000621128 CNGB1Q14028 1251 aaPredicted RBP12.89□□□□□ -0.35
NCAM1-228ENST00000621128 ZNF326Q5BKZ1 582 aaKnown RBP12.88□□□□□ -0.35
NCAM1-228ENST00000621128 CHMP7Q8WUX9 453 aaPredicted RBP12.85□□□□□ -0.35
NCAM1-228ENST00000621128 CCNB3Q8WWL7 1395 aa12.83□□□□□ -0.36
NCAM1-228ENST00000621128 CADPSQ9ULU8 1353 aa12.82□□□□□ -0.36
NCAM1-228ENST00000621128 CHIC2Q9UKJ5 165 aa12.81□□□□□ -0.36
NCAM1-228ENST00000621128 DDX10Q13206 875 aaKnown RBP12.8□□□□□ -0.36
NCAM1-228ENST00000621128 TSPY4P0CV99 314 aa12.79□□□□□ -0.36
NCAM1-228ENST00000621128 TSPY10P0CW01 314 aa12.79□□□□□ -0.36
NCAM1-228ENST00000621128 MIER1Q8N108 512 aa12.77□□□□□ -0.36
NCAM1-228ENST00000621128 PDS5BQ9NTI5 1447 aa12.77□□□□□ -0.37
NCAM1-228ENST00000621128 TIMELESSQ9UNS1 1208 aa12.75□□□□□ -0.37
NCAM1-228ENST00000621128 DAXXQ9UER7 740 aaPredicted RBP12.74□□□□□ -0.37
NCAM1-228ENST00000621128 SLC4A1APQ9BWU0 796 aaKnown RBP12.74□□□□□ -0.37
NCAM1-228ENST00000621128 RAPGEF2Q9Y4G8 1499 aa12.73□□□□□ -0.37
NCAM1-228ENST00000621128 PLEKHD1A6NEE1 506 aa12.73□□□□□ -0.37
NCAM1-228ENST00000621128 NCAPD3P42695 1498 aa12.72□□□□□ -0.37
NCAM1-228ENST00000621128 RRP7BPQ9NSQ0 103 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms