Protein–RNA interactions for Protein: Q9Y6D6

ARFGEF1, Brefeldin A-inhibited guanine nucleotide-exchange protein 1, humanhuman

Predictions only

Length 1,849 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1Q9Y6D6 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
ARFGEF1Q9Y6D6 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC25.4■■□□□ 1.66
ARFGEF1Q9Y6D6 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC25.4■■□□□ 1.66
ARFGEF1Q9Y6D6 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC25.39■■□□□ 1.66
ARFGEF1Q9Y6D6 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC25.39■■□□□ 1.66
ARFGEF1Q9Y6D6 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.66
ARFGEF1Q9Y6D6 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
ARFGEF1Q9Y6D6 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
ARFGEF1Q9Y6D6 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
ARFGEF1Q9Y6D6 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC25.39■■□□□ 1.65
ARFGEF1Q9Y6D6 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC25.39■■□□□ 1.65
ARFGEF1Q9Y6D6 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC25.39■■□□□ 1.65
ARFGEF1Q9Y6D6 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC25.39■■□□□ 1.65
ARFGEF1Q9Y6D6 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC25.39■■□□□ 1.65
ARFGEF1Q9Y6D6 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC25.39■■□□□ 1.65
ARFGEF1Q9Y6D6 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC25.39■■□□□ 1.65
ARFGEF1Q9Y6D6 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
ARFGEF1Q9Y6D6 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
ARFGEF1Q9Y6D6 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
ARFGEF1Q9Y6D6 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
ARFGEF1Q9Y6D6 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC25.38■■□□□ 1.65
ARFGEF1Q9Y6D6 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC25.38■■□□□ 1.65
ARFGEF1Q9Y6D6 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC25.38■■□□□ 1.65
ARFGEF1Q9Y6D6 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
ARFGEF1Q9Y6D6 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
ARFGEF1Q9Y6D6 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
ARFGEF1Q9Y6D6 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
ARFGEF1Q9Y6D6 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
ARFGEF1Q9Y6D6 AL353807.1-201ENST00000427475 662 ntBASIC25.37■■□□□ 1.65
ARFGEF1Q9Y6D6 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC25.37■■□□□ 1.65
ARFGEF1Q9Y6D6 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
ARFGEF1Q9Y6D6 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC25.37■■□□□ 1.65
ARFGEF1Q9Y6D6 AL590326.2-201ENST00000625139 305 ntBASIC25.37■■□□□ 1.65
ARFGEF1Q9Y6D6 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
ARFGEF1Q9Y6D6 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC25.37■■□□□ 1.65
ARFGEF1Q9Y6D6 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
ARFGEF1Q9Y6D6 SRI-203ENST00000419179 1307 ntTSL 2 BASIC25.37■■□□□ 1.65
ARFGEF1Q9Y6D6 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC25.37■■□□□ 1.65
ARFGEF1Q9Y6D6 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
ARFGEF1Q9Y6D6 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
ARFGEF1Q9Y6D6 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
ARFGEF1Q9Y6D6 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC25.37■■□□□ 1.65
ARFGEF1Q9Y6D6 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC25.37■■□□□ 1.65
ARFGEF1Q9Y6D6 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
ARFGEF1Q9Y6D6 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
ARFGEF1Q9Y6D6 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
ARFGEF1Q9Y6D6 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC25.36■■□□□ 1.65
ARFGEF1Q9Y6D6 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC25.36■■□□□ 1.65
ARFGEF1Q9Y6D6 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC25.36■■□□□ 1.65
ARFGEF1Q9Y6D6 Six3os1_6.1-201ENST00000620790 196 ntBASIC25.36■■□□□ 1.65
ARFGEF1Q9Y6D6 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
ARFGEF1Q9Y6D6 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
ARFGEF1Q9Y6D6 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC25.35■■□□□ 1.65
ARFGEF1Q9Y6D6 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC25.35■■□□□ 1.65
ARFGEF1Q9Y6D6 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC25.35■■□□□ 1.65
ARFGEF1Q9Y6D6 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC25.35■■□□□ 1.65
ARFGEF1Q9Y6D6 REXO1L10P-201ENST00000615707 1290 ntBASIC25.35■■□□□ 1.65
ARFGEF1Q9Y6D6 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
ARFGEF1Q9Y6D6 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC25.35■■□□□ 1.65
ARFGEF1Q9Y6D6 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
ARFGEF1Q9Y6D6 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
ARFGEF1Q9Y6D6 NFE2L3P1-201ENST00000588207 1959 ntBASIC25.35■■□□□ 1.65
ARFGEF1Q9Y6D6 TERF1P1-201ENST00000311003 1181 ntBASIC25.35■■□□□ 1.65
ARFGEF1Q9Y6D6 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC25.35■■□□□ 1.65
ARFGEF1Q9Y6D6 AF186192.3-201ENST00000583427 947 ntBASIC25.35■■□□□ 1.65
ARFGEF1Q9Y6D6 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
ARFGEF1Q9Y6D6 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
ARFGEF1Q9Y6D6 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC25.34■■□□□ 1.65
ARFGEF1Q9Y6D6 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC25.34■■□□□ 1.65
ARFGEF1Q9Y6D6 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
ARFGEF1Q9Y6D6 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
ARFGEF1Q9Y6D6 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
ARFGEF1Q9Y6D6 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
ARFGEF1Q9Y6D6 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC25.34■■□□□ 1.65
ARFGEF1Q9Y6D6 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC25.34■■□□□ 1.65
ARFGEF1Q9Y6D6 RBM17P1-201ENST00000453646 1190 ntBASIC25.34■■□□□ 1.65
ARFGEF1Q9Y6D6 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC25.34■■□□□ 1.65
ARFGEF1Q9Y6D6 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
ARFGEF1Q9Y6D6 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
ARFGEF1Q9Y6D6 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC25.34■■□□□ 1.65
ARFGEF1Q9Y6D6 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC25.33■■□□□ 1.65
ARFGEF1Q9Y6D6 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
ARFGEF1Q9Y6D6 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
ARFGEF1Q9Y6D6 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC25.33■■□□□ 1.65
ARFGEF1Q9Y6D6 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
ARFGEF1Q9Y6D6 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC25.33■■□□□ 1.64
ARFGEF1Q9Y6D6 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
ARFGEF1Q9Y6D6 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC25.33■■□□□ 1.64
ARFGEF1Q9Y6D6 RPS15-203ENST00000586096 570 ntTSL 2 BASIC25.33■■□□□ 1.64
ARFGEF1Q9Y6D6 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC25.33■■□□□ 1.64
ARFGEF1Q9Y6D6 DECR2-212ENST00000627716 352 ntTSL 2 BASIC25.33■■□□□ 1.64
ARFGEF1Q9Y6D6 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
ARFGEF1Q9Y6D6 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
ARFGEF1Q9Y6D6 AC079598.2-202ENST00000546624 1451 ntBASIC25.32■■□□□ 1.64
ARFGEF1Q9Y6D6 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
ARFGEF1Q9Y6D6 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC25.32■■□□□ 1.64
ARFGEF1Q9Y6D6 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
ARFGEF1Q9Y6D6 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
ARFGEF1Q9Y6D6 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC25.32■■□□□ 1.64
ARFGEF1Q9Y6D6 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC25.32■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms