Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.67■□□□□ 0.74
AP4B1Q9Y6B7 AC112907.3-201ENST00000577781 2400 ntBASIC19.67■□□□□ 0.74
AP4B1Q9Y6B7 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
AP4B1Q9Y6B7 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
AP4B1Q9Y6B7 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
AP4B1Q9Y6B7 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.67■□□□□ 0.74
AP4B1Q9Y6B7 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.67■□□□□ 0.74
AP4B1Q9Y6B7 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
AP4B1Q9Y6B7 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.66■□□□□ 0.74
AP4B1Q9Y6B7 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
AP4B1Q9Y6B7 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.66■□□□□ 0.74
AP4B1Q9Y6B7 AC027702.1-201ENST00000563810 1770 ntBASIC19.66■□□□□ 0.74
AP4B1Q9Y6B7 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.66■□□□□ 0.74
AP4B1Q9Y6B7 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
AP4B1Q9Y6B7 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
AP4B1Q9Y6B7 AL358852.1-201ENST00000623174 1268 ntBASIC19.66■□□□□ 0.74
AP4B1Q9Y6B7 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
AP4B1Q9Y6B7 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
AP4B1Q9Y6B7 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
AP4B1Q9Y6B7 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.66■□□□□ 0.74
AP4B1Q9Y6B7 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
AP4B1Q9Y6B7 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
AP4B1Q9Y6B7 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
AP4B1Q9Y6B7 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
AP4B1Q9Y6B7 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
AP4B1Q9Y6B7 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
AP4B1Q9Y6B7 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
AP4B1Q9Y6B7 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
AP4B1Q9Y6B7 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.66■□□□□ 0.74
AP4B1Q9Y6B7 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
AP4B1Q9Y6B7 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
AP4B1Q9Y6B7 BX323043.1-201ENST00000641006 1765 ntBASIC19.65■□□□□ 0.74
AP4B1Q9Y6B7 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
AP4B1Q9Y6B7 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
AP4B1Q9Y6B7 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
AP4B1Q9Y6B7 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
AP4B1Q9Y6B7 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
AP4B1Q9Y6B7 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
AP4B1Q9Y6B7 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.65■□□□□ 0.74
AP4B1Q9Y6B7 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.65■□□□□ 0.74
AP4B1Q9Y6B7 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
AP4B1Q9Y6B7 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.65■□□□□ 0.74
AP4B1Q9Y6B7 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
AP4B1Q9Y6B7 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
AP4B1Q9Y6B7 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.65■□□□□ 0.74
AP4B1Q9Y6B7 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.65■□□□□ 0.74
AP4B1Q9Y6B7 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
AP4B1Q9Y6B7 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
AP4B1Q9Y6B7 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
AP4B1Q9Y6B7 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.65■□□□□ 0.74
AP4B1Q9Y6B7 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.64■□□□□ 0.74
AP4B1Q9Y6B7 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
AP4B1Q9Y6B7 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
AP4B1Q9Y6B7 AC098818.2-201ENST00000564925 2320 ntBASIC19.64■□□□□ 0.74
AP4B1Q9Y6B7 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
AP4B1Q9Y6B7 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
AP4B1Q9Y6B7 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
AP4B1Q9Y6B7 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
AP4B1Q9Y6B7 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.64■□□□□ 0.73
AP4B1Q9Y6B7 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.64■□□□□ 0.73
AP4B1Q9Y6B7 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.64■□□□□ 0.73
AP4B1Q9Y6B7 AL354811.1-201ENST00000610286 706 ntBASIC19.64■□□□□ 0.73
AP4B1Q9Y6B7 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.64■□□□□ 0.73
AP4B1Q9Y6B7 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
AP4B1Q9Y6B7 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
AP4B1Q9Y6B7 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.64■□□□□ 0.73
AP4B1Q9Y6B7 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
AP4B1Q9Y6B7 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.64■□□□□ 0.73
AP4B1Q9Y6B7 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
AP4B1Q9Y6B7 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
AP4B1Q9Y6B7 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
AP4B1Q9Y6B7 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
AP4B1Q9Y6B7 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
AP4B1Q9Y6B7 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
AP4B1Q9Y6B7 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
AP4B1Q9Y6B7 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.63■□□□□ 0.73
AP4B1Q9Y6B7 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.63■□□□□ 0.73
AP4B1Q9Y6B7 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.63■□□□□ 0.73
AP4B1Q9Y6B7 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
AP4B1Q9Y6B7 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
AP4B1Q9Y6B7 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
AP4B1Q9Y6B7 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
AP4B1Q9Y6B7 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.63■□□□□ 0.73
AP4B1Q9Y6B7 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
AP4B1Q9Y6B7 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.63■□□□□ 0.73
AP4B1Q9Y6B7 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
AP4B1Q9Y6B7 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.63■□□□□ 0.73
AP4B1Q9Y6B7 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.63■□□□□ 0.73
AP4B1Q9Y6B7 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.63■□□□□ 0.73
AP4B1Q9Y6B7 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
AP4B1Q9Y6B7 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
AP4B1Q9Y6B7 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
AP4B1Q9Y6B7 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
AP4B1Q9Y6B7 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.63■□□□□ 0.73
AP4B1Q9Y6B7 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
AP4B1Q9Y6B7 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.63■□□□□ 0.73
AP4B1Q9Y6B7 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
AP4B1Q9Y6B7 PLK5-205ENST00000642079 1969 ntBASIC19.63■□□□□ 0.73
AP4B1Q9Y6B7 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
AP4B1Q9Y6B7 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms