Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHGC4Q9Y5F7 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.78■□□□□ 0.92
PCDHGC4Q9Y5F7 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHGC4Q9Y5F7 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
PCDHGC4Q9Y5F7 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHGC4Q9Y5F7 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
PCDHGC4Q9Y5F7 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.77■□□□□ 0.92
PCDHGC4Q9Y5F7 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
PCDHGC4Q9Y5F7 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.77■□□□□ 0.92
PCDHGC4Q9Y5F7 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHGC4Q9Y5F7 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHGC4Q9Y5F7 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHGC4Q9Y5F7 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
PCDHGC4Q9Y5F7 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.77■□□□□ 0.91
PCDHGC4Q9Y5F7 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.77■□□□□ 0.91
PCDHGC4Q9Y5F7 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGC4Q9Y5F7 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
PCDHGC4Q9Y5F7 GPX1P1-201ENST00000388829 606 ntBASIC20.76■□□□□ 0.91
PCDHGC4Q9Y5F7 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.76■□□□□ 0.91
PCDHGC4Q9Y5F7 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.76■□□□□ 0.91
PCDHGC4Q9Y5F7 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.76■□□□□ 0.91
PCDHGC4Q9Y5F7 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGC4Q9Y5F7 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGC4Q9Y5F7 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGC4Q9Y5F7 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
PCDHGC4Q9Y5F7 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGC4Q9Y5F7 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGC4Q9Y5F7 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGC4Q9Y5F7 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGC4Q9Y5F7 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.75■□□□□ 0.91
PCDHGC4Q9Y5F7 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGC4Q9Y5F7 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
PCDHGC4Q9Y5F7 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGC4Q9Y5F7 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
PCDHGC4Q9Y5F7 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGC4Q9Y5F7 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.75■□□□□ 0.91
PCDHGC4Q9Y5F7 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.75■□□□□ 0.91
PCDHGC4Q9Y5F7 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.75■□□□□ 0.91
PCDHGC4Q9Y5F7 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
PCDHGC4Q9Y5F7 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.75■□□□□ 0.91
PCDHGC4Q9Y5F7 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGC4Q9Y5F7 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
PCDHGC4Q9Y5F7 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGC4Q9Y5F7 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
PCDHGC4Q9Y5F7 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGC4Q9Y5F7 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGC4Q9Y5F7 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
PCDHGC4Q9Y5F7 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.74■□□□□ 0.91
PCDHGC4Q9Y5F7 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
PCDHGC4Q9Y5F7 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
PCDHGC4Q9Y5F7 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.74■□□□□ 0.91
PCDHGC4Q9Y5F7 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
PCDHGC4Q9Y5F7 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGC4Q9Y5F7 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGC4Q9Y5F7 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
PCDHGC4Q9Y5F7 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGC4Q9Y5F7 AL512625.2-201ENST00000417533 625 ntBASIC20.74■□□□□ 0.91
PCDHGC4Q9Y5F7 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGC4Q9Y5F7 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.74■□□□□ 0.91
PCDHGC4Q9Y5F7 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.74■□□□□ 0.91
PCDHGC4Q9Y5F7 AC010980.2-201ENST00000587099 1412 ntBASIC20.74■□□□□ 0.91
PCDHGC4Q9Y5F7 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGC4Q9Y5F7 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGC4Q9Y5F7 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGC4Q9Y5F7 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGC4Q9Y5F7 AC006128.1-201ENST00000624704 1661 ntBASIC20.73■□□□□ 0.91
PCDHGC4Q9Y5F7 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
PCDHGC4Q9Y5F7 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGC4Q9Y5F7 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.73■□□□□ 0.91
PCDHGC4Q9Y5F7 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGC4Q9Y5F7 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.73■□□□□ 0.91
PCDHGC4Q9Y5F7 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGC4Q9Y5F7 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.73■□□□□ 0.91
PCDHGC4Q9Y5F7 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGC4Q9Y5F7 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGC4Q9Y5F7 HLA-L-209ENST00000420110 1011 ntBASIC20.73■□□□□ 0.91
PCDHGC4Q9Y5F7 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.73■□□□□ 0.91
PCDHGC4Q9Y5F7 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
PCDHGC4Q9Y5F7 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.73■□□□□ 0.91
PCDHGC4Q9Y5F7 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.73■□□□□ 0.91
PCDHGC4Q9Y5F7 AL109923.1-201ENST00000618799 583 ntBASIC20.73■□□□□ 0.91
PCDHGC4Q9Y5F7 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGC4Q9Y5F7 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.73■□□□□ 0.91
PCDHGC4Q9Y5F7 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.73■□□□□ 0.91
PCDHGC4Q9Y5F7 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHGC4Q9Y5F7 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.72■□□□□ 0.91
PCDHGC4Q9Y5F7 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHGC4Q9Y5F7 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.72■□□□□ 0.91
PCDHGC4Q9Y5F7 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
PCDHGC4Q9Y5F7 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHGC4Q9Y5F7 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHGC4Q9Y5F7 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHGC4Q9Y5F7 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.72■□□□□ 0.91
PCDHGC4Q9Y5F7 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHGC4Q9Y5F7 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHGC4Q9Y5F7 ID1-201ENST00000376105 1233 ntBASIC20.72■□□□□ 0.91
PCDHGC4Q9Y5F7 AL355472.2-201ENST00000422958 438 ntBASIC20.72■□□□□ 0.91
PCDHGC4Q9Y5F7 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.72■□□□□ 0.91
PCDHGC4Q9Y5F7 MKRN4P-201ENST00000444706 1521 ntBASIC20.72■□□□□ 0.91
PCDHGC4Q9Y5F7 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms