Protein–RNA interactions for Protein: Q9Y333

LSM2, U6 snRNA-associated Sm-like protein LSm2, humanhuman

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2Q9Y333 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LSM2Q9Y333 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.27■□□□□ 0.52
LSM2Q9Y333 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LSM2Q9Y333 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
LSM2Q9Y333 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
LSM2Q9Y333 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
LSM2Q9Y333 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.27■□□□□ 0.51
LSM2Q9Y333 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
LSM2Q9Y333 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.27■□□□□ 0.51
LSM2Q9Y333 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
LSM2Q9Y333 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
LSM2Q9Y333 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
LSM2Q9Y333 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
LSM2Q9Y333 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LSM2Q9Y333 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LSM2Q9Y333 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LSM2Q9Y333 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.26■□□□□ 0.51
LSM2Q9Y333 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
LSM2Q9Y333 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
LSM2Q9Y333 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.26■□□□□ 0.51
LSM2Q9Y333 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC18.26■□□□□ 0.51
LSM2Q9Y333 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LSM2Q9Y333 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LSM2Q9Y333 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.26■□□□□ 0.51
LSM2Q9Y333 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
LSM2Q9Y333 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LSM2Q9Y333 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LSM2Q9Y333 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
LSM2Q9Y333 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
LSM2Q9Y333 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
LSM2Q9Y333 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
LSM2Q9Y333 SRD5A1P1-201ENST00000442297 786 ntBASIC18.25■□□□□ 0.51
LSM2Q9Y333 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
LSM2Q9Y333 AL138724.1-201ENST00000606771 1088 ntBASIC18.25■□□□□ 0.51
LSM2Q9Y333 AC136469.2-201ENST00000623944 1028 ntBASIC18.25■□□□□ 0.51
LSM2Q9Y333 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LSM2Q9Y333 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.25■□□□□ 0.51
LSM2Q9Y333 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
LSM2Q9Y333 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.25■□□□□ 0.51
LSM2Q9Y333 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
LSM2Q9Y333 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
LSM2Q9Y333 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LSM2Q9Y333 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LSM2Q9Y333 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
LSM2Q9Y333 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LSM2Q9Y333 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LSM2Q9Y333 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
LSM2Q9Y333 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.25■□□□□ 0.51
LSM2Q9Y333 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
LSM2Q9Y333 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.24■□□□□ 0.51
LSM2Q9Y333 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
LSM2Q9Y333 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.24■□□□□ 0.51
LSM2Q9Y333 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.24■□□□□ 0.51
LSM2Q9Y333 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
LSM2Q9Y333 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.24■□□□□ 0.51
LSM2Q9Y333 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.24■□□□□ 0.51
LSM2Q9Y333 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LSM2Q9Y333 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LSM2Q9Y333 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LSM2Q9Y333 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LSM2Q9Y333 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
LSM2Q9Y333 SERBP1P1-201ENST00000396021 1160 ntBASIC18.24■□□□□ 0.51
LSM2Q9Y333 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LSM2Q9Y333 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LSM2Q9Y333 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LSM2Q9Y333 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.24■□□□□ 0.51
LSM2Q9Y333 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.24■□□□□ 0.51
LSM2Q9Y333 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.24■□□□□ 0.51
LSM2Q9Y333 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LSM2Q9Y333 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LSM2Q9Y333 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.24■□□□□ 0.51
LSM2Q9Y333 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LSM2Q9Y333 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LSM2Q9Y333 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LSM2Q9Y333 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
LSM2Q9Y333 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LSM2Q9Y333 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LSM2Q9Y333 AC005332.7-201ENST00000614046 2005 ntBASIC18.23■□□□□ 0.51
LSM2Q9Y333 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.23■□□□□ 0.51
LSM2Q9Y333 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
LSM2Q9Y333 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LSM2Q9Y333 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
LSM2Q9Y333 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LSM2Q9Y333 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.23■□□□□ 0.51
LSM2Q9Y333 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
LSM2Q9Y333 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC18.23■□□□□ 0.51
LSM2Q9Y333 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.23■□□□□ 0.51
LSM2Q9Y333 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC18.23■□□□□ 0.51
LSM2Q9Y333 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.23■□□□□ 0.51
LSM2Q9Y333 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.23■□□□□ 0.51
LSM2Q9Y333 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LSM2Q9Y333 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LSM2Q9Y333 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LSM2Q9Y333 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LSM2Q9Y333 AC004408.2-201ENST00000623613 2777 ntBASIC18.23■□□□□ 0.51
LSM2Q9Y333 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.23■□□□□ 0.51
LSM2Q9Y333 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
LSM2Q9Y333 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LSM2Q9Y333 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.22■□□□□ 0.51
LSM2Q9Y333 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms