Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
NCKAP1Q9Y2A7 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
NCKAP1Q9Y2A7 AC092368.3-202ENST00000574180 1591 ntBASIC20.64■□□□□ 0.9
NCKAP1Q9Y2A7 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NCKAP1Q9Y2A7 PKD1P6-201ENST00000343738 4769 ntBASIC20.64■□□□□ 0.89
NCKAP1Q9Y2A7 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NCKAP1Q9Y2A7 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
NCKAP1Q9Y2A7 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.64■□□□□ 0.89
NCKAP1Q9Y2A7 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.64■□□□□ 0.89
NCKAP1Q9Y2A7 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NCKAP1Q9Y2A7 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
NCKAP1Q9Y2A7 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.64■□□□□ 0.89
NCKAP1Q9Y2A7 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NCKAP1Q9Y2A7 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NCKAP1Q9Y2A7 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NCKAP1Q9Y2A7 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
NCKAP1Q9Y2A7 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.63■□□□□ 0.89
NCKAP1Q9Y2A7 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.63■□□□□ 0.89
NCKAP1Q9Y2A7 PGM5P4-201ENST00000421970 445 ntBASIC20.63■□□□□ 0.89
NCKAP1Q9Y2A7 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NCKAP1Q9Y2A7 AL158047.1-201ENST00000445918 881 ntBASIC20.63■□□□□ 0.89
NCKAP1Q9Y2A7 PNMA6B-201ENST00000538162 1200 ntBASIC20.63■□□□□ 0.89
NCKAP1Q9Y2A7 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.63■□□□□ 0.89
NCKAP1Q9Y2A7 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.63■□□□□ 0.89
NCKAP1Q9Y2A7 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NCKAP1Q9Y2A7 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.63■□□□□ 0.89
NCKAP1Q9Y2A7 AC105020.6-201ENST00000621523 1217 ntBASIC20.63■□□□□ 0.89
NCKAP1Q9Y2A7 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
NCKAP1Q9Y2A7 ECEL1P1-201ENST00000373592 1742 ntBASIC20.63■□□□□ 0.89
NCKAP1Q9Y2A7 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
NCKAP1Q9Y2A7 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NCKAP1Q9Y2A7 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NCKAP1Q9Y2A7 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.62■□□□□ 0.89
NCKAP1Q9Y2A7 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NCKAP1Q9Y2A7 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.62■□□□□ 0.89
NCKAP1Q9Y2A7 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.62■□□□□ 0.89
NCKAP1Q9Y2A7 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NCKAP1Q9Y2A7 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
NCKAP1Q9Y2A7 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NCKAP1Q9Y2A7 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NCKAP1Q9Y2A7 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NCKAP1Q9Y2A7 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NCKAP1Q9Y2A7 GCSHP5-201ENST00000443090 522 ntBASIC20.62■□□□□ 0.89
NCKAP1Q9Y2A7 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
NCKAP1Q9Y2A7 AC098590.1-201ENST00000468126 897 ntBASIC20.62■□□□□ 0.89
NCKAP1Q9Y2A7 RPS2P52-201ENST00000469610 820 ntBASIC20.62■□□□□ 0.89
NCKAP1Q9Y2A7 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.62■□□□□ 0.89
NCKAP1Q9Y2A7 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.62■□□□□ 0.89
NCKAP1Q9Y2A7 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.62■□□□□ 0.89
NCKAP1Q9Y2A7 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NCKAP1Q9Y2A7 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
NCKAP1Q9Y2A7 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
NCKAP1Q9Y2A7 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
NCKAP1Q9Y2A7 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NCKAP1Q9Y2A7 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
NCKAP1Q9Y2A7 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NCKAP1Q9Y2A7 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NCKAP1Q9Y2A7 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
NCKAP1Q9Y2A7 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
NCKAP1Q9Y2A7 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NCKAP1Q9Y2A7 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
NCKAP1Q9Y2A7 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NCKAP1Q9Y2A7 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
NCKAP1Q9Y2A7 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
NCKAP1Q9Y2A7 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NCKAP1Q9Y2A7 AC073648.6-201ENST00000641589 218 ntBASIC20.61■□□□□ 0.89
NCKAP1Q9Y2A7 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NCKAP1Q9Y2A7 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NCKAP1Q9Y2A7 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NCKAP1Q9Y2A7 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.61■□□□□ 0.89
NCKAP1Q9Y2A7 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.6■□□□□ 0.89
NCKAP1Q9Y2A7 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
NCKAP1Q9Y2A7 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
NCKAP1Q9Y2A7 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.6■□□□□ 0.89
NCKAP1Q9Y2A7 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.6■□□□□ 0.89
NCKAP1Q9Y2A7 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.6■□□□□ 0.89
NCKAP1Q9Y2A7 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NCKAP1Q9Y2A7 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NCKAP1Q9Y2A7 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.6■□□□□ 0.89
NCKAP1Q9Y2A7 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
NCKAP1Q9Y2A7 KRT17P3-201ENST00000420566 1262 ntBASIC20.6■□□□□ 0.89
NCKAP1Q9Y2A7 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NCKAP1Q9Y2A7 UNC93B4-201ENST00000505679 747 ntBASIC20.6■□□□□ 0.89
NCKAP1Q9Y2A7 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NCKAP1Q9Y2A7 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.6■□□□□ 0.89
NCKAP1Q9Y2A7 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
NCKAP1Q9Y2A7 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NCKAP1Q9Y2A7 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.6■□□□□ 0.89
NCKAP1Q9Y2A7 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NCKAP1Q9Y2A7 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
NCKAP1Q9Y2A7 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
NCKAP1Q9Y2A7 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.59■□□□□ 0.89
NCKAP1Q9Y2A7 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NCKAP1Q9Y2A7 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NCKAP1Q9Y2A7 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.59■□□□□ 0.89
NCKAP1Q9Y2A7 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NCKAP1Q9Y2A7 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.59■□□□□ 0.89
NCKAP1Q9Y2A7 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
NCKAP1Q9Y2A7 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.59■□□□□ 0.89
NCKAP1Q9Y2A7 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms