Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
EBF1Q9UH73 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
EBF1Q9UH73 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
EBF1Q9UH73 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
EBF1Q9UH73 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
EBF1Q9UH73 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
EBF1Q9UH73 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
EBF1Q9UH73 MCRIP2P1-201ENST00000394346 511 ntBASIC20.95■□□□□ 0.94
EBF1Q9UH73 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
EBF1Q9UH73 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
EBF1Q9UH73 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.95■□□□□ 0.94
EBF1Q9UH73 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.95■□□□□ 0.94
EBF1Q9UH73 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.95■□□□□ 0.94
EBF1Q9UH73 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
EBF1Q9UH73 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
EBF1Q9UH73 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
EBF1Q9UH73 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
EBF1Q9UH73 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
EBF1Q9UH73 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.94■□□□□ 0.94
EBF1Q9UH73 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
EBF1Q9UH73 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
EBF1Q9UH73 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
EBF1Q9UH73 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
EBF1Q9UH73 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
EBF1Q9UH73 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
EBF1Q9UH73 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
EBF1Q9UH73 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.94■□□□□ 0.94
EBF1Q9UH73 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
EBF1Q9UH73 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.94■□□□□ 0.94
EBF1Q9UH73 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.94■□□□□ 0.94
EBF1Q9UH73 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.94■□□□□ 0.94
EBF1Q9UH73 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.94■□□□□ 0.94
EBF1Q9UH73 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
EBF1Q9UH73 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
EBF1Q9UH73 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.94■□□□□ 0.94
EBF1Q9UH73 C11orf96-202ENST00000528572 1834 ntBASIC20.94■□□□□ 0.94
EBF1Q9UH73 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
EBF1Q9UH73 AC010542.4-201ENST00000563151 1910 ntBASIC20.94■□□□□ 0.94
EBF1Q9UH73 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
EBF1Q9UH73 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.94■□□□□ 0.94
EBF1Q9UH73 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
EBF1Q9UH73 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
EBF1Q9UH73 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
EBF1Q9UH73 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
EBF1Q9UH73 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.93■□□□□ 0.94
EBF1Q9UH73 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
EBF1Q9UH73 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
EBF1Q9UH73 KRT17P3-201ENST00000420566 1262 ntBASIC20.93■□□□□ 0.94
EBF1Q9UH73 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.93■□□□□ 0.94
EBF1Q9UH73 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.93■□□□□ 0.94
EBF1Q9UH73 RPPH1-201ENST00000516869 333 ntBASIC20.93■□□□□ 0.94
EBF1Q9UH73 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
EBF1Q9UH73 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
EBF1Q9UH73 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
EBF1Q9UH73 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.93■□□□□ 0.94
EBF1Q9UH73 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.93■□□□□ 0.94
EBF1Q9UH73 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.93■□□□□ 0.94
EBF1Q9UH73 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
EBF1Q9UH73 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
EBF1Q9UH73 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
EBF1Q9UH73 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
EBF1Q9UH73 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
EBF1Q9UH73 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
EBF1Q9UH73 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
EBF1Q9UH73 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
EBF1Q9UH73 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
EBF1Q9UH73 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
EBF1Q9UH73 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
EBF1Q9UH73 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.92■□□□□ 0.94
EBF1Q9UH73 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
EBF1Q9UH73 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
EBF1Q9UH73 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.92■□□□□ 0.94
EBF1Q9UH73 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.92■□□□□ 0.94
EBF1Q9UH73 PNMA6B-201ENST00000538162 1200 ntBASIC20.92■□□□□ 0.94
EBF1Q9UH73 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
EBF1Q9UH73 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
EBF1Q9UH73 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
EBF1Q9UH73 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
EBF1Q9UH73 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.92■□□□□ 0.94
EBF1Q9UH73 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
EBF1Q9UH73 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
EBF1Q9UH73 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
EBF1Q9UH73 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
EBF1Q9UH73 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
EBF1Q9UH73 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.91■□□□□ 0.94
EBF1Q9UH73 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
EBF1Q9UH73 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
EBF1Q9UH73 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
EBF1Q9UH73 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.91■□□□□ 0.94
EBF1Q9UH73 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.91■□□□□ 0.94
EBF1Q9UH73 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.91■□□□□ 0.94
EBF1Q9UH73 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.91■□□□□ 0.94
EBF1Q9UH73 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
EBF1Q9UH73 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.91■□□□□ 0.94
EBF1Q9UH73 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
EBF1Q9UH73 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
EBF1Q9UH73 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
EBF1Q9UH73 AL121603.2-201ENST00000557373 2117 ntBASIC20.9■□□□□ 0.94
EBF1Q9UH73 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.9■□□□□ 0.94
EBF1Q9UH73 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms