Protein–RNA interactions for Protein: Q9NUQ8

ABCF3, ATP-binding cassette sub-family F member 3, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3Q9NUQ8 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ABCF3Q9NUQ8 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
ABCF3Q9NUQ8 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
ABCF3Q9NUQ8 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
ABCF3Q9NUQ8 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ABCF3Q9NUQ8 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ABCF3Q9NUQ8 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
ABCF3Q9NUQ8 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.82■□□□□ 0.92
ABCF3Q9NUQ8 AIRN-201ENST00000601203 4374 ntBASIC20.82■□□□□ 0.92
ABCF3Q9NUQ8 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ABCF3Q9NUQ8 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.82■□□□□ 0.92
ABCF3Q9NUQ8 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.82■□□□□ 0.92
ABCF3Q9NUQ8 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.82■□□□□ 0.92
ABCF3Q9NUQ8 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
ABCF3Q9NUQ8 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ABCF3Q9NUQ8 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ABCF3Q9NUQ8 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.82■□□□□ 0.92
ABCF3Q9NUQ8 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.82■□□□□ 0.92
ABCF3Q9NUQ8 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.82■□□□□ 0.92
ABCF3Q9NUQ8 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
ABCF3Q9NUQ8 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
ABCF3Q9NUQ8 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ABCF3Q9NUQ8 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
ABCF3Q9NUQ8 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ABCF3Q9NUQ8 AC112907.3-201ENST00000577781 2400 ntBASIC20.82■□□□□ 0.92
ABCF3Q9NUQ8 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.81■□□□□ 0.92
ABCF3Q9NUQ8 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
ABCF3Q9NUQ8 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ABCF3Q9NUQ8 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
ABCF3Q9NUQ8 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ABCF3Q9NUQ8 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ABCF3Q9NUQ8 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ABCF3Q9NUQ8 AC006128.1-201ENST00000624704 1661 ntBASIC20.81■□□□□ 0.92
ABCF3Q9NUQ8 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ABCF3Q9NUQ8 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.81■□□□□ 0.92
ABCF3Q9NUQ8 AC012414.1-201ENST00000556676 535 ntBASIC20.81■□□□□ 0.92
ABCF3Q9NUQ8 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.81■□□□□ 0.92
ABCF3Q9NUQ8 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.81■□□□□ 0.92
ABCF3Q9NUQ8 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ABCF3Q9NUQ8 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ABCF3Q9NUQ8 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ABCF3Q9NUQ8 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.81■□□□□ 0.92
ABCF3Q9NUQ8 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ABCF3Q9NUQ8 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.8■□□□□ 0.92
ABCF3Q9NUQ8 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ABCF3Q9NUQ8 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
ABCF3Q9NUQ8 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.8■□□□□ 0.92
ABCF3Q9NUQ8 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
ABCF3Q9NUQ8 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
ABCF3Q9NUQ8 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.8■□□□□ 0.92
ABCF3Q9NUQ8 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ABCF3Q9NUQ8 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ABCF3Q9NUQ8 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ABCF3Q9NUQ8 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ABCF3Q9NUQ8 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ABCF3Q9NUQ8 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.8■□□□□ 0.92
ABCF3Q9NUQ8 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ABCF3Q9NUQ8 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ABCF3Q9NUQ8 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ABCF3Q9NUQ8 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
ABCF3Q9NUQ8 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ABCF3Q9NUQ8 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ABCF3Q9NUQ8 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ABCF3Q9NUQ8 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
ABCF3Q9NUQ8 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.79■□□□□ 0.92
ABCF3Q9NUQ8 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ABCF3Q9NUQ8 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ABCF3Q9NUQ8 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ABCF3Q9NUQ8 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.79■□□□□ 0.92
ABCF3Q9NUQ8 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
ABCF3Q9NUQ8 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.79■□□□□ 0.92
ABCF3Q9NUQ8 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
ABCF3Q9NUQ8 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ABCF3Q9NUQ8 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ABCF3Q9NUQ8 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
ABCF3Q9NUQ8 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ABCF3Q9NUQ8 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
ABCF3Q9NUQ8 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ABCF3Q9NUQ8 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ABCF3Q9NUQ8 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.78■□□□□ 0.92
ABCF3Q9NUQ8 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ABCF3Q9NUQ8 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
ABCF3Q9NUQ8 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
ABCF3Q9NUQ8 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ABCF3Q9NUQ8 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ABCF3Q9NUQ8 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ABCF3Q9NUQ8 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ABCF3Q9NUQ8 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ABCF3Q9NUQ8 AC027702.1-201ENST00000563810 1770 ntBASIC20.78■□□□□ 0.92
ABCF3Q9NUQ8 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.78■□□□□ 0.92
ABCF3Q9NUQ8 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.78■□□□□ 0.92
ABCF3Q9NUQ8 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.78■□□□□ 0.92
ABCF3Q9NUQ8 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.78■□□□□ 0.92
ABCF3Q9NUQ8 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
ABCF3Q9NUQ8 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
ABCF3Q9NUQ8 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
ABCF3Q9NUQ8 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ABCF3Q9NUQ8 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
ABCF3Q9NUQ8 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ABCF3Q9NUQ8 AC019069.1-201ENST00000610008 1333 ntBASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms