Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 AC044849.2-201ENST00000606596 710 ntBASIC16.19■□□□□ 0.18
SMCO4Q9NRQ5 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SMCO4Q9NRQ5 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
SMCO4Q9NRQ5 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.19■□□□□ 0.18
SMCO4Q9NRQ5 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
SMCO4Q9NRQ5 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SMCO4Q9NRQ5 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
SMCO4Q9NRQ5 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SMCO4Q9NRQ5 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
SMCO4Q9NRQ5 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
SMCO4Q9NRQ5 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SMCO4Q9NRQ5 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC16.19■□□□□ 0.18
SMCO4Q9NRQ5 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SMCO4Q9NRQ5 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
SMCO4Q9NRQ5 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC16.18■□□□□ 0.18
SMCO4Q9NRQ5 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
SMCO4Q9NRQ5 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.18■□□□□ 0.18
SMCO4Q9NRQ5 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
SMCO4Q9NRQ5 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMCO4Q9NRQ5 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC16.18■□□□□ 0.18
SMCO4Q9NRQ5 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SMCO4Q9NRQ5 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMCO4Q9NRQ5 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.18■□□□□ 0.18
SMCO4Q9NRQ5 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMCO4Q9NRQ5 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMCO4Q9NRQ5 AC025884.2-201ENST00000553429 711 ntBASIC16.18■□□□□ 0.18
SMCO4Q9NRQ5 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
SMCO4Q9NRQ5 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMCO4Q9NRQ5 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC16.18■□□□□ 0.18
SMCO4Q9NRQ5 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC16.18■□□□□ 0.18
SMCO4Q9NRQ5 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC16.18■□□□□ 0.18
SMCO4Q9NRQ5 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC16.18■□□□□ 0.18
SMCO4Q9NRQ5 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMCO4Q9NRQ5 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SMCO4Q9NRQ5 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMCO4Q9NRQ5 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMCO4Q9NRQ5 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC16.17■□□□□ 0.18
SMCO4Q9NRQ5 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SMCO4Q9NRQ5 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SMCO4Q9NRQ5 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
SMCO4Q9NRQ5 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.17■□□□□ 0.18
SMCO4Q9NRQ5 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMCO4Q9NRQ5 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMCO4Q9NRQ5 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.17■□□□□ 0.18
SMCO4Q9NRQ5 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMCO4Q9NRQ5 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMCO4Q9NRQ5 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SMCO4Q9NRQ5 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMCO4Q9NRQ5 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMCO4Q9NRQ5 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMCO4Q9NRQ5 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMCO4Q9NRQ5 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMCO4Q9NRQ5 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMCO4Q9NRQ5 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SMCO4Q9NRQ5 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMCO4Q9NRQ5 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SMCO4Q9NRQ5 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMCO4Q9NRQ5 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMCO4Q9NRQ5 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
SMCO4Q9NRQ5 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
SMCO4Q9NRQ5 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMCO4Q9NRQ5 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMCO4Q9NRQ5 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC16.17■□□□□ 0.18
SMCO4Q9NRQ5 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMCO4Q9NRQ5 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.17■□□□□ 0.18
SMCO4Q9NRQ5 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC16.17■□□□□ 0.18
SMCO4Q9NRQ5 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMCO4Q9NRQ5 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMCO4Q9NRQ5 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMCO4Q9NRQ5 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
SMCO4Q9NRQ5 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMCO4Q9NRQ5 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC16.16■□□□□ 0.18
SMCO4Q9NRQ5 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SMCO4Q9NRQ5 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMCO4Q9NRQ5 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMCO4Q9NRQ5 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.16■□□□□ 0.18
SMCO4Q9NRQ5 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMCO4Q9NRQ5 TCF3P1-201ENST00000423021 1937 ntBASIC16.16■□□□□ 0.18
SMCO4Q9NRQ5 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMCO4Q9NRQ5 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMCO4Q9NRQ5 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMCO4Q9NRQ5 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SMCO4Q9NRQ5 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SMCO4Q9NRQ5 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SMCO4Q9NRQ5 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SMCO4Q9NRQ5 AC007225.1-201ENST00000566331 1836 ntBASIC16.16■□□□□ 0.18
SMCO4Q9NRQ5 AL138781.2-201ENST00000617896 1843 ntBASIC16.16■□□□□ 0.18
SMCO4Q9NRQ5 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SMCO4Q9NRQ5 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.16■□□□□ 0.18
SMCO4Q9NRQ5 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMCO4Q9NRQ5 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
SMCO4Q9NRQ5 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SMCO4Q9NRQ5 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMCO4Q9NRQ5 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMCO4Q9NRQ5 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMCO4Q9NRQ5 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SMCO4Q9NRQ5 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.15■□□□□ 0.18
SMCO4Q9NRQ5 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SMCO4Q9NRQ5 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SMCO4Q9NRQ5 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms