Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
BRF2Q9HAW0 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
BRF2Q9HAW0 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
BRF2Q9HAW0 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
BRF2Q9HAW0 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
BRF2Q9HAW0 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.67■□□□□ 0.74
BRF2Q9HAW0 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
BRF2Q9HAW0 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
BRF2Q9HAW0 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
BRF2Q9HAW0 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.67■□□□□ 0.74
BRF2Q9HAW0 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
BRF2Q9HAW0 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.67■□□□□ 0.74
BRF2Q9HAW0 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.67■□□□□ 0.74
BRF2Q9HAW0 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.67■□□□□ 0.74
BRF2Q9HAW0 UBE2DNL-204ENST00000602536 740 ntBASIC19.67■□□□□ 0.74
BRF2Q9HAW0 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
BRF2Q9HAW0 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
BRF2Q9HAW0 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
BRF2Q9HAW0 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.67■□□□□ 0.74
BRF2Q9HAW0 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
BRF2Q9HAW0 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.67■□□□□ 0.74
BRF2Q9HAW0 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
BRF2Q9HAW0 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
BRF2Q9HAW0 AC092667.1-201ENST00000434301 2586 ntBASIC19.67■□□□□ 0.74
BRF2Q9HAW0 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
BRF2Q9HAW0 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
BRF2Q9HAW0 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
BRF2Q9HAW0 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
BRF2Q9HAW0 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
BRF2Q9HAW0 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
BRF2Q9HAW0 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.66■□□□□ 0.74
BRF2Q9HAW0 AC073130.3-201ENST00000624389 2278 ntBASIC19.66■□□□□ 0.74
BRF2Q9HAW0 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
BRF2Q9HAW0 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BRF2Q9HAW0 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
BRF2Q9HAW0 AC007322.3-201ENST00000426526 701 ntBASIC19.66■□□□□ 0.74
BRF2Q9HAW0 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.66■□□□□ 0.74
BRF2Q9HAW0 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.66■□□□□ 0.74
BRF2Q9HAW0 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
BRF2Q9HAW0 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
BRF2Q9HAW0 MIR2861-201ENST00000636310 90 ntBASIC19.66■□□□□ 0.74
BRF2Q9HAW0 MYCNOS-205ENST00000641950 531 ntBASIC19.66■□□□□ 0.74
BRF2Q9HAW0 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
BRF2Q9HAW0 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
BRF2Q9HAW0 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BRF2Q9HAW0 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
BRF2Q9HAW0 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
BRF2Q9HAW0 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
BRF2Q9HAW0 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BRF2Q9HAW0 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
BRF2Q9HAW0 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
BRF2Q9HAW0 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BRF2Q9HAW0 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
BRF2Q9HAW0 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BRF2Q9HAW0 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BRF2Q9HAW0 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.65■□□□□ 0.74
BRF2Q9HAW0 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.65■□□□□ 0.74
BRF2Q9HAW0 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
BRF2Q9HAW0 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.65■□□□□ 0.74
BRF2Q9HAW0 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
BRF2Q9HAW0 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
BRF2Q9HAW0 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
BRF2Q9HAW0 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.65■□□□□ 0.74
BRF2Q9HAW0 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
BRF2Q9HAW0 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.65■□□□□ 0.74
BRF2Q9HAW0 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
BRF2Q9HAW0 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
BRF2Q9HAW0 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
BRF2Q9HAW0 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
BRF2Q9HAW0 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.74
BRF2Q9HAW0 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
BRF2Q9HAW0 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
BRF2Q9HAW0 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.64■□□□□ 0.73
BRF2Q9HAW0 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
BRF2Q9HAW0 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
BRF2Q9HAW0 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.64■□□□□ 0.73
BRF2Q9HAW0 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.64■□□□□ 0.73
BRF2Q9HAW0 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
BRF2Q9HAW0 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
BRF2Q9HAW0 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.73
BRF2Q9HAW0 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.64■□□□□ 0.73
BRF2Q9HAW0 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
BRF2Q9HAW0 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
BRF2Q9HAW0 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
BRF2Q9HAW0 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
BRF2Q9HAW0 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
BRF2Q9HAW0 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
BRF2Q9HAW0 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BRF2Q9HAW0 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
BRF2Q9HAW0 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BRF2Q9HAW0 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.63■□□□□ 0.73
BRF2Q9HAW0 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
BRF2Q9HAW0 AL121603.2-201ENST00000557373 2117 ntBASIC19.63■□□□□ 0.73
BRF2Q9HAW0 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.63■□□□□ 0.73
BRF2Q9HAW0 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.63■□□□□ 0.73
BRF2Q9HAW0 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BRF2Q9HAW0 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
BRF2Q9HAW0 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
BRF2Q9HAW0 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
BRF2Q9HAW0 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms