Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM2Q9C040 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM2Q9C040 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM2Q9C040 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM2Q9C040 KRT18P20-201ENST00000548986 1279 ntBASIC18.89■□□□□ 0.61
TRIM2Q9C040 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.89■□□□□ 0.61
TRIM2Q9C040 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM2Q9C040 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM2Q9C040 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM2Q9C040 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM2Q9C040 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.89■□□□□ 0.61
TRIM2Q9C040 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM2Q9C040 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.88■□□□□ 0.61
TRIM2Q9C040 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.88■□□□□ 0.61
TRIM2Q9C040 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM2Q9C040 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.88■□□□□ 0.61
TRIM2Q9C040 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
TRIM2Q9C040 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM2Q9C040 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM2Q9C040 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM2Q9C040 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM2Q9C040 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.88■□□□□ 0.61
TRIM2Q9C040 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
TRIM2Q9C040 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.88■□□□□ 0.61
TRIM2Q9C040 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM2Q9C040 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM2Q9C040 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM2Q9C040 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
TRIM2Q9C040 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM2Q9C040 GABARAPL3-202ENST00000624044 1851 ntBASIC18.88■□□□□ 0.61
TRIM2Q9C040 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
TRIM2Q9C040 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM2Q9C040 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM2Q9C040 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM2Q9C040 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM2Q9C040 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
TRIM2Q9C040 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM2Q9C040 LINC01006-201ENST00000333319 2292 ntBASIC18.87■□□□□ 0.61
TRIM2Q9C040 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
TRIM2Q9C040 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
TRIM2Q9C040 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM2Q9C040 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM2Q9C040 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM2Q9C040 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM2Q9C040 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM2Q9C040 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
TRIM2Q9C040 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.87■□□□□ 0.61
TRIM2Q9C040 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.87■□□□□ 0.61
TRIM2Q9C040 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.87■□□□□ 0.61
TRIM2Q9C040 IKBKGP1-201ENST00000612193 1073 ntBASIC18.87■□□□□ 0.61
TRIM2Q9C040 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM2Q9C040 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM2Q9C040 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
TRIM2Q9C040 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM2Q9C040 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM2Q9C040 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM2Q9C040 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
TRIM2Q9C040 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.86■□□□□ 0.61
TRIM2Q9C040 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM2Q9C040 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM2Q9C040 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM2Q9C040 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM2Q9C040 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.86■□□□□ 0.61
TRIM2Q9C040 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.86■□□□□ 0.61
TRIM2Q9C040 SLC7A5P2-201ENST00000553010 536 ntBASIC18.86■□□□□ 0.61
TRIM2Q9C040 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM2Q9C040 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.86■□□□□ 0.61
TRIM2Q9C040 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM2Q9C040 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM2Q9C040 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
TRIM2Q9C040 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM2Q9C040 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.86■□□□□ 0.61
TRIM2Q9C040 AP005212.1-201ENST00000581547 1997 ntBASIC18.86■□□□□ 0.61
TRIM2Q9C040 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM2Q9C040 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
TRIM2Q9C040 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM2Q9C040 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM2Q9C040 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM2Q9C040 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM2Q9C040 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM2Q9C040 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM2Q9C040 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM2Q9C040 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.85■□□□□ 0.61
TRIM2Q9C040 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.85■□□□□ 0.61
TRIM2Q9C040 NTF6G-201ENST00000591094 616 ntBASIC18.85■□□□□ 0.61
TRIM2Q9C040 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.85■□□□□ 0.61
TRIM2Q9C040 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
TRIM2Q9C040 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.85■□□□□ 0.61
TRIM2Q9C040 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.85■□□□□ 0.61
TRIM2Q9C040 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.85■□□□□ 0.61
TRIM2Q9C040 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM2Q9C040 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM2Q9C040 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM2Q9C040 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM2Q9C040 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM2Q9C040 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.84■□□□□ 0.61
TRIM2Q9C040 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM2Q9C040 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM2Q9C040 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM2Q9C040 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms