Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CNTNAP3Q9BZ76 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CNTNAP3Q9BZ76 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CNTNAP3Q9BZ76 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CNTNAP3Q9BZ76 LINC00543-201ENST00000567234 1845 ntBASIC19.67■□□□□ 0.74
CNTNAP3Q9BZ76 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CNTNAP3Q9BZ76 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CNTNAP3Q9BZ76 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CNTNAP3Q9BZ76 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CNTNAP3Q9BZ76 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CNTNAP3Q9BZ76 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.67■□□□□ 0.74
CNTNAP3Q9BZ76 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.67■□□□□ 0.74
CNTNAP3Q9BZ76 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
CNTNAP3Q9BZ76 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CNTNAP3Q9BZ76 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CNTNAP3Q9BZ76 CYP2D8P-201ENST00000433633 1490 ntBASIC19.67■□□□□ 0.74
CNTNAP3Q9BZ76 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CNTNAP3Q9BZ76 AP004607.7-201ENST00000527152 1677 ntBASIC19.66■□□□□ 0.74
CNTNAP3Q9BZ76 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CNTNAP3Q9BZ76 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CNTNAP3Q9BZ76 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CNTNAP3Q9BZ76 UNC93B2-201ENST00000285383 730 ntBASIC19.66■□□□□ 0.74
CNTNAP3Q9BZ76 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CNTNAP3Q9BZ76 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC19.66■□□□□ 0.74
CNTNAP3Q9BZ76 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CNTNAP3Q9BZ76 AC010203.1-204ENST00000548782 407 ntBASIC19.66■□□□□ 0.74
CNTNAP3Q9BZ76 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.66■□□□□ 0.74
CNTNAP3Q9BZ76 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.66■□□□□ 0.74
CNTNAP3Q9BZ76 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CNTNAP3Q9BZ76 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
CNTNAP3Q9BZ76 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.66■□□□□ 0.74
CNTNAP3Q9BZ76 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
CNTNAP3Q9BZ76 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.66■□□□□ 0.74
CNTNAP3Q9BZ76 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CNTNAP3Q9BZ76 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CNTNAP3Q9BZ76 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CNTNAP3Q9BZ76 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.66■□□□□ 0.74
CNTNAP3Q9BZ76 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CNTNAP3Q9BZ76 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.66■□□□□ 0.74
CNTNAP3Q9BZ76 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CNTNAP3Q9BZ76 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CNTNAP3Q9BZ76 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNTNAP3Q9BZ76 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
CNTNAP3Q9BZ76 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
CNTNAP3Q9BZ76 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CNTNAP3Q9BZ76 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNTNAP3Q9BZ76 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CNTNAP3Q9BZ76 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CNTNAP3Q9BZ76 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNTNAP3Q9BZ76 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNTNAP3Q9BZ76 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CNTNAP3Q9BZ76 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNTNAP3Q9BZ76 PVRIG2P-201ENST00000435460 978 ntBASIC19.65■□□□□ 0.74
CNTNAP3Q9BZ76 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC19.65■□□□□ 0.74
CNTNAP3Q9BZ76 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.65■□□□□ 0.74
CNTNAP3Q9BZ76 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.65■□□□□ 0.74
CNTNAP3Q9BZ76 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
CNTNAP3Q9BZ76 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.65■□□□□ 0.74
CNTNAP3Q9BZ76 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CNTNAP3Q9BZ76 AP003733.4-201ENST00000623785 1697 ntBASIC19.65■□□□□ 0.74
CNTNAP3Q9BZ76 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNTNAP3Q9BZ76 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.74
CNTNAP3Q9BZ76 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CNTNAP3Q9BZ76 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CNTNAP3Q9BZ76 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CNTNAP3Q9BZ76 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CNTNAP3Q9BZ76 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CNTNAP3Q9BZ76 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CNTNAP3Q9BZ76 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.64■□□□□ 0.73
CNTNAP3Q9BZ76 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CNTNAP3Q9BZ76 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CNTNAP3Q9BZ76 FAM197Y1-201ENST00000421178 764 ntBASIC19.64■□□□□ 0.73
CNTNAP3Q9BZ76 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CNTNAP3Q9BZ76 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.64■□□□□ 0.73
CNTNAP3Q9BZ76 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.64■□□□□ 0.73
CNTNAP3Q9BZ76 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.64■□□□□ 0.73
CNTNAP3Q9BZ76 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CNTNAP3Q9BZ76 KRT16P2-201ENST00000414673 1423 ntBASIC19.64■□□□□ 0.73
CNTNAP3Q9BZ76 AC087633.2-202ENST00000565166 1439 ntBASIC19.64■□□□□ 0.73
CNTNAP3Q9BZ76 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.64■□□□□ 0.73
CNTNAP3Q9BZ76 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CNTNAP3Q9BZ76 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CNTNAP3Q9BZ76 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CNTNAP3Q9BZ76 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CNTNAP3Q9BZ76 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNTNAP3Q9BZ76 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.63■□□□□ 0.73
CNTNAP3Q9BZ76 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CNTNAP3Q9BZ76 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.63■□□□□ 0.73
CNTNAP3Q9BZ76 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.63■□□□□ 0.73
CNTNAP3Q9BZ76 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNTNAP3Q9BZ76 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CNTNAP3Q9BZ76 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.63■□□□□ 0.73
CNTNAP3Q9BZ76 AF186192.3-201ENST00000583427 947 ntBASIC19.63■□□□□ 0.73
CNTNAP3Q9BZ76 FAM21FP-204ENST00000608637 956 ntBASIC19.63■□□□□ 0.73
CNTNAP3Q9BZ76 AC010947.1-201ENST00000623454 693 ntBASIC19.63■□□□□ 0.73
CNTNAP3Q9BZ76 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
CNTNAP3Q9BZ76 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CNTNAP3Q9BZ76 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.62■□□□□ 0.73
CNTNAP3Q9BZ76 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.62■□□□□ 0.73
CNTNAP3Q9BZ76 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms