Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
FOXC2Q99958 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC17.38■□□□□ 0.37
FOXC2Q99958 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
FOXC2Q99958 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
FOXC2Q99958 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
FOXC2Q99958 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
FOXC2Q99958 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.38■□□□□ 0.37
FOXC2Q99958 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
FOXC2Q99958 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
FOXC2Q99958 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
FOXC2Q99958 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
FOXC2Q99958 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
FOXC2Q99958 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.38■□□□□ 0.37
FOXC2Q99958 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
FOXC2Q99958 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.38■□□□□ 0.37
FOXC2Q99958 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.38■□□□□ 0.37
FOXC2Q99958 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
FOXC2Q99958 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.38■□□□□ 0.37
FOXC2Q99958 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
FOXC2Q99958 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
FOXC2Q99958 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
FOXC2Q99958 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
FOXC2Q99958 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
FOXC2Q99958 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
FOXC2Q99958 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
FOXC2Q99958 CYP21A1P-202ENST00000354927 1481 ntBASIC17.37■□□□□ 0.37
FOXC2Q99958 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
FOXC2Q99958 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
FOXC2Q99958 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
FOXC2Q99958 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
FOXC2Q99958 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
FOXC2Q99958 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
FOXC2Q99958 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
FOXC2Q99958 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
FOXC2Q99958 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
FOXC2Q99958 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
FOXC2Q99958 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
FOXC2Q99958 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
FOXC2Q99958 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
FOXC2Q99958 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.37■□□□□ 0.37
FOXC2Q99958 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.37■□□□□ 0.37
FOXC2Q99958 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.37■□□□□ 0.37
FOXC2Q99958 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.37■□□□□ 0.37
FOXC2Q99958 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.37■□□□□ 0.37
FOXC2Q99958 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
FOXC2Q99958 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC17.37■□□□□ 0.37
FOXC2Q99958 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
FOXC2Q99958 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
FOXC2Q99958 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.37■□□□□ 0.37
FOXC2Q99958 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
FOXC2Q99958 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
FOXC2Q99958 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
FOXC2Q99958 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
FOXC2Q99958 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
FOXC2Q99958 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
FOXC2Q99958 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
FOXC2Q99958 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
FOXC2Q99958 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.36■□□□□ 0.37
FOXC2Q99958 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.36■□□□□ 0.37
FOXC2Q99958 AP003071.4-201ENST00000562276 1284 ntBASIC17.36■□□□□ 0.37
FOXC2Q99958 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.36■□□□□ 0.37
FOXC2Q99958 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.36■□□□□ 0.37
FOXC2Q99958 AC005363.2-201ENST00000618631 242 ntBASIC17.36■□□□□ 0.37
FOXC2Q99958 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
FOXC2Q99958 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
FOXC2Q99958 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
FOXC2Q99958 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC17.36■□□□□ 0.37
FOXC2Q99958 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.36■□□□□ 0.37
FOXC2Q99958 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.36■□□□□ 0.37
FOXC2Q99958 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
FOXC2Q99958 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC17.36■□□□□ 0.37
FOXC2Q99958 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
FOXC2Q99958 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FOXC2Q99958 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
FOXC2Q99958 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FOXC2Q99958 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
FOXC2Q99958 AL355355.2-201ENST00000442321 338 ntBASIC17.35■□□□□ 0.37
FOXC2Q99958 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.35■□□□□ 0.37
FOXC2Q99958 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.35■□□□□ 0.37
FOXC2Q99958 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.35■□□□□ 0.37
FOXC2Q99958 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.35■□□□□ 0.37
FOXC2Q99958 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
FOXC2Q99958 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
FOXC2Q99958 AC145285.6-201ENST00000604632 637 ntBASIC17.35■□□□□ 0.37
FOXC2Q99958 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.35■□□□□ 0.37
FOXC2Q99958 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FOXC2Q99958 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
FOXC2Q99958 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FOXC2Q99958 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FOXC2Q99958 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FOXC2Q99958 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC17.35■□□□□ 0.37
FOXC2Q99958 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FOXC2Q99958 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FOXC2Q99958 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
FOXC2Q99958 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FOXC2Q99958 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FOXC2Q99958 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
FOXC2Q99958 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC17.34■□□□□ 0.37
FOXC2Q99958 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FOXC2Q99958 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms