Protein–RNA interactions for Protein: Q99698

LYST, Lysosomal-trafficking regulator, humanhuman

Predictions only

Length 3,801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSTQ99698 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
LYSTQ99698 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
LYSTQ99698 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LYSTQ99698 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LYSTQ99698 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LYSTQ99698 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
LYSTQ99698 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC14.35□□□□□ -0.11
LYSTQ99698 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC14.35□□□□□ -0.11
LYSTQ99698 TK2-204ENST00000525974 1178 ntTSL 2 BASIC14.35□□□□□ -0.11
LYSTQ99698 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC14.35□□□□□ -0.11
LYSTQ99698 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
LYSTQ99698 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC14.35□□□□□ -0.11
LYSTQ99698 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
LYSTQ99698 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LYSTQ99698 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC14.35□□□□□ -0.11
LYSTQ99698 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
LYSTQ99698 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC14.35□□□□□ -0.11
LYSTQ99698 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC14.35□□□□□ -0.11
LYSTQ99698 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC14.35□□□□□ -0.11
LYSTQ99698 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC14.35□□□□□ -0.11
LYSTQ99698 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LYSTQ99698 METTL23-204ENST00000586752 904 ntTSL 2 BASIC14.35□□□□□ -0.11
LYSTQ99698 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC14.35□□□□□ -0.11
LYSTQ99698 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC14.34□□□□□ -0.11
LYSTQ99698 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LYSTQ99698 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC14.34□□□□□ -0.11
LYSTQ99698 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
LYSTQ99698 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC14.34□□□□□ -0.11
LYSTQ99698 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LYSTQ99698 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LYSTQ99698 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LYSTQ99698 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
LYSTQ99698 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
LYSTQ99698 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC14.34□□□□□ -0.11
LYSTQ99698 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC14.34□□□□□ -0.11
LYSTQ99698 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LYSTQ99698 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC14.34□□□□□ -0.11
LYSTQ99698 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LYSTQ99698 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LYSTQ99698 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LYSTQ99698 CRK-204ENST00000574295 1391 ntTSL 5 BASIC14.34□□□□□ -0.11
LYSTQ99698 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LYSTQ99698 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LYSTQ99698 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LYSTQ99698 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LYSTQ99698 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC14.34□□□□□ -0.11
LYSTQ99698 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LYSTQ99698 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC14.34□□□□□ -0.11
LYSTQ99698 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
LYSTQ99698 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
LYSTQ99698 SRI-203ENST00000419179 1307 ntTSL 2 BASIC14.33□□□□□ -0.11
LYSTQ99698 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
LYSTQ99698 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC14.33□□□□□ -0.11
LYSTQ99698 THEM4-205ENST00000489410 643 ntTSL 2 BASIC14.33□□□□□ -0.11
LYSTQ99698 HES2-206ENST00000489730 730 ntTSL 2 BASIC14.33□□□□□ -0.11
LYSTQ99698 AL589743.5-201ENST00000616611 1050 ntBASIC14.33□□□□□ -0.11
LYSTQ99698 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
LYSTQ99698 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC14.33□□□□□ -0.11
LYSTQ99698 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
LYSTQ99698 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC14.33□□□□□ -0.12
LYSTQ99698 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.12
LYSTQ99698 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC14.33□□□□□ -0.12
LYSTQ99698 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC14.33□□□□□ -0.12
LYSTQ99698 AC080038.3-201ENST00000623346 1952 ntBASIC14.33□□□□□ -0.12
LYSTQ99698 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LYSTQ99698 CYP2D8P-201ENST00000433633 1490 ntBASIC14.33□□□□□ -0.12
LYSTQ99698 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LYSTQ99698 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
LYSTQ99698 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LYSTQ99698 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC14.33□□□□□ -0.12
LYSTQ99698 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LYSTQ99698 FAM21FP-204ENST00000608637 956 ntBASIC14.33□□□□□ -0.12
LYSTQ99698 Six3os1_6.1-201ENST00000620790 196 ntBASIC14.33□□□□□ -0.12
LYSTQ99698 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LYSTQ99698 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LYSTQ99698 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LYSTQ99698 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LYSTQ99698 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC14.32□□□□□ -0.12
LYSTQ99698 CRYGFP-201ENST00000418459 633 ntBASIC14.32□□□□□ -0.12
LYSTQ99698 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC14.32□□□□□ -0.12
LYSTQ99698 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
LYSTQ99698 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC14.32□□□□□ -0.12
LYSTQ99698 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC14.32□□□□□ -0.12
LYSTQ99698 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LYSTQ99698 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LYSTQ99698 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
LYSTQ99698 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LYSTQ99698 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
LYSTQ99698 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LYSTQ99698 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
LYSTQ99698 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
LYSTQ99698 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC14.32□□□□□ -0.12
LYSTQ99698 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC14.32□□□□□ -0.12
LYSTQ99698 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC14.32□□□□□ -0.12
LYSTQ99698 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LYSTQ99698 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LYSTQ99698 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
LYSTQ99698 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LYSTQ99698 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC14.32□□□□□ -0.12
LYSTQ99698 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms