Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
SCAF11Q99590 AC242852.2-201ENST00000615738 1807 ntBASIC29.78■■■□□ 2.36
SCAF11Q99590 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC29.78■■■□□ 2.36
SCAF11Q99590 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
SCAF11Q99590 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
SCAF11Q99590 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC29.78■■■□□ 2.36
SCAF11Q99590 PTPA-214ENST00000423100 988 ntTSL 2 BASIC29.78■■■□□ 2.36
SCAF11Q99590 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC29.78■■■□□ 2.36
SCAF11Q99590 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC29.78■■■□□ 2.36
SCAF11Q99590 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC29.78■■■□□ 2.36
SCAF11Q99590 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
SCAF11Q99590 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC29.78■■■□□ 2.36
SCAF11Q99590 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC29.77■■■□□ 2.36
SCAF11Q99590 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC29.77■■■□□ 2.36
SCAF11Q99590 TMPOP1-202ENST00000424642 1267 ntBASIC29.77■■■□□ 2.36
SCAF11Q99590 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC29.77■■■□□ 2.36
SCAF11Q99590 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
SCAF11Q99590 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC29.77■■■□□ 2.36
SCAF11Q99590 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC29.77■■■□□ 2.36
SCAF11Q99590 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC29.77■■■□□ 2.36
SCAF11Q99590 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
SCAF11Q99590 AC010542.4-201ENST00000563151 1910 ntBASIC29.77■■■□□ 2.36
SCAF11Q99590 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC29.76■■■□□ 2.36
SCAF11Q99590 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC29.76■■■□□ 2.36
SCAF11Q99590 PENK-204ENST00000518770 863 ntTSL 2 BASIC29.76■■■□□ 2.35
SCAF11Q99590 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC29.76■■■□□ 2.35
SCAF11Q99590 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC29.76■■■□□ 2.35
SCAF11Q99590 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
SCAF11Q99590 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
SCAF11Q99590 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
SCAF11Q99590 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
SCAF11Q99590 TERT-206ENST00000508104 2486 ntTSL 5 BASIC29.76■■■□□ 2.35
SCAF11Q99590 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC29.75■■■□□ 2.35
SCAF11Q99590 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC29.75■■■□□ 2.35
SCAF11Q99590 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC29.75■■■□□ 2.35
SCAF11Q99590 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
SCAF11Q99590 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC29.75■■■□□ 2.35
SCAF11Q99590 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
SCAF11Q99590 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
SCAF11Q99590 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC29.75■■■□□ 2.35
SCAF11Q99590 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC29.75■■■□□ 2.35
SCAF11Q99590 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC29.75■■■□□ 2.35
SCAF11Q99590 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
SCAF11Q99590 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC29.74■■■□□ 2.35
SCAF11Q99590 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
SCAF11Q99590 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC29.74■■■□□ 2.35
SCAF11Q99590 RARRES2P10-201ENST00000564312 460 ntBASIC29.74■■■□□ 2.35
SCAF11Q99590 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC29.74■■■□□ 2.35
SCAF11Q99590 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC29.74■■■□□ 2.35
SCAF11Q99590 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC29.74■■■□□ 2.35
SCAF11Q99590 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC29.74■■■□□ 2.35
SCAF11Q99590 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
SCAF11Q99590 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
SCAF11Q99590 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
SCAF11Q99590 GUSBP5-202ENST00000510805 1989 ntBASIC29.74■■■□□ 2.35
SCAF11Q99590 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
SCAF11Q99590 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC29.74■■■□□ 2.35
SCAF11Q99590 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
SCAF11Q99590 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC29.74■■■□□ 2.35
SCAF11Q99590 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC29.74■■■□□ 2.35
SCAF11Q99590 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC29.74■■■□□ 2.35
SCAF11Q99590 AL353708.3-201ENST00000610272 989 ntBASIC29.74■■■□□ 2.35
SCAF11Q99590 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
SCAF11Q99590 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
SCAF11Q99590 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC29.73■■■□□ 2.35
SCAF11Q99590 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
SCAF11Q99590 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
SCAF11Q99590 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC29.73■■■□□ 2.35
SCAF11Q99590 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
SCAF11Q99590 KRASP1-201ENST00000407852 552 ntBASIC29.73■■■□□ 2.35
SCAF11Q99590 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC29.73■■■□□ 2.35
SCAF11Q99590 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC29.73■■■□□ 2.35
SCAF11Q99590 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC29.73■■■□□ 2.35
SCAF11Q99590 AC110285.5-201ENST00000611501 352 ntBASIC29.73■■■□□ 2.35
SCAF11Q99590 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
SCAF11Q99590 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
SCAF11Q99590 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC29.72■■■□□ 2.35
SCAF11Q99590 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC29.72■■■□□ 2.35
SCAF11Q99590 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC29.72■■■□□ 2.35
SCAF11Q99590 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC29.72■■■□□ 2.35
SCAF11Q99590 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC29.72■■■□□ 2.35
SCAF11Q99590 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC29.72■■■□□ 2.35
SCAF11Q99590 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC29.72■■■□□ 2.35
SCAF11Q99590 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC29.72■■■□□ 2.35
SCAF11Q99590 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC29.71■■■□□ 2.35
SCAF11Q99590 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
SCAF11Q99590 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
SCAF11Q99590 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
SCAF11Q99590 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
SCAF11Q99590 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC29.71■■■□□ 2.35
SCAF11Q99590 PRKY-204ENST00000533551 1019 ntBASIC29.71■■■□□ 2.35
SCAF11Q99590 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC29.71■■■□□ 2.35
SCAF11Q99590 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC29.71■■■□□ 2.35
SCAF11Q99590 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC29.71■■■□□ 2.35
SCAF11Q99590 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
SCAF11Q99590 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
SCAF11Q99590 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC29.7■■■□□ 2.35
SCAF11Q99590 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC29.7■■■□□ 2.35
SCAF11Q99590 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
SCAF11Q99590 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms