Protein–RNA interactions for Protein: Q96RS6

NUDCD1, NudC domain-containing protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1Q96RS6 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.21■□□□□ 0.99
NUDCD1Q96RS6 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NUDCD1Q96RS6 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
NUDCD1Q96RS6 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.21■□□□□ 0.99
NUDCD1Q96RS6 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NUDCD1Q96RS6 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.21■□□□□ 0.99
NUDCD1Q96RS6 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.2■□□□□ 0.99
NUDCD1Q96RS6 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
NUDCD1Q96RS6 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.2■□□□□ 0.98
NUDCD1Q96RS6 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
NUDCD1Q96RS6 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
NUDCD1Q96RS6 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NUDCD1Q96RS6 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NUDCD1Q96RS6 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.2■□□□□ 0.98
NUDCD1Q96RS6 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
NUDCD1Q96RS6 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.2■□□□□ 0.98
NUDCD1Q96RS6 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NUDCD1Q96RS6 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NUDCD1Q96RS6 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NUDCD1Q96RS6 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
NUDCD1Q96RS6 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
NUDCD1Q96RS6 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NUDCD1Q96RS6 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NUDCD1Q96RS6 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NUDCD1Q96RS6 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NUDCD1Q96RS6 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
NUDCD1Q96RS6 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
NUDCD1Q96RS6 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
NUDCD1Q96RS6 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
NUDCD1Q96RS6 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
NUDCD1Q96RS6 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.19■□□□□ 0.98
NUDCD1Q96RS6 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
NUDCD1Q96RS6 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.19■□□□□ 0.98
NUDCD1Q96RS6 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.19■□□□□ 0.98
NUDCD1Q96RS6 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NUDCD1Q96RS6 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NUDCD1Q96RS6 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NUDCD1Q96RS6 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
NUDCD1Q96RS6 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NUDCD1Q96RS6 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
NUDCD1Q96RS6 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
NUDCD1Q96RS6 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NUDCD1Q96RS6 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
NUDCD1Q96RS6 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NUDCD1Q96RS6 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.18■□□□□ 0.98
NUDCD1Q96RS6 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.18■□□□□ 0.98
NUDCD1Q96RS6 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NUDCD1Q96RS6 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NUDCD1Q96RS6 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.18■□□□□ 0.98
NUDCD1Q96RS6 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
NUDCD1Q96RS6 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NUDCD1Q96RS6 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
NUDCD1Q96RS6 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.18■□□□□ 0.98
NUDCD1Q96RS6 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.18■□□□□ 0.98
NUDCD1Q96RS6 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.17■□□□□ 0.98
NUDCD1Q96RS6 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
NUDCD1Q96RS6 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NUDCD1Q96RS6 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.17■□□□□ 0.98
NUDCD1Q96RS6 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.17■□□□□ 0.98
NUDCD1Q96RS6 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.17■□□□□ 0.98
NUDCD1Q96RS6 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.17■□□□□ 0.98
NUDCD1Q96RS6 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.17■□□□□ 0.98
NUDCD1Q96RS6 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.17■□□□□ 0.98
NUDCD1Q96RS6 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NUDCD1Q96RS6 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.17■□□□□ 0.98
NUDCD1Q96RS6 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.17■□□□□ 0.98
NUDCD1Q96RS6 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
NUDCD1Q96RS6 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.17■□□□□ 0.98
NUDCD1Q96RS6 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NUDCD1Q96RS6 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
NUDCD1Q96RS6 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NUDCD1Q96RS6 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
NUDCD1Q96RS6 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NUDCD1Q96RS6 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.16■□□□□ 0.98
NUDCD1Q96RS6 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NUDCD1Q96RS6 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
NUDCD1Q96RS6 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.16■□□□□ 0.98
NUDCD1Q96RS6 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NUDCD1Q96RS6 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.16■□□□□ 0.98
NUDCD1Q96RS6 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.16■□□□□ 0.98
NUDCD1Q96RS6 AC092666.2-201ENST00000613287 246 ntBASIC21.16■□□□□ 0.98
NUDCD1Q96RS6 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
NUDCD1Q96RS6 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
NUDCD1Q96RS6 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
NUDCD1Q96RS6 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NUDCD1Q96RS6 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NUDCD1Q96RS6 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NUDCD1Q96RS6 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NUDCD1Q96RS6 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.15■□□□□ 0.98
NUDCD1Q96RS6 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NUDCD1Q96RS6 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
NUDCD1Q96RS6 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NUDCD1Q96RS6 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NUDCD1Q96RS6 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
NUDCD1Q96RS6 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.15■□□□□ 0.98
NUDCD1Q96RS6 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.15■□□□□ 0.98
NUDCD1Q96RS6 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NUDCD1Q96RS6 MFSD11-216ENST00000590393 1141 ntBASIC21.15■□□□□ 0.98
NUDCD1Q96RS6 AL137784.2-201ENST00000607332 1000 ntBASIC21.15■□□□□ 0.98
NUDCD1Q96RS6 BID-214ENST00000617586 542 ntTSL 5 BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms